EcR
Information EcR
- Description
The gene Ecdysone receptor is referred to in FlyBase by the symbol DmelEcR (CG1765, FBgn0000546). It is a protein_coding_gene from Dmel. It has 6 annotated transcripts and 6 polypeptides (3 unique). Gene sequence location is 2R:6087873..6169087. Its molecular function is described by 16 unique terms, many of which group under: binding; DNA-binding transcription factor activity; DNA-binding transcription factor activity, RNA polymerase II-specific; protein binding; steroid binding. It is involved in the biological process described with 51 unique terms, many of which group under: embryo development ending in birth or egg hatching; cuticle development; embryonic development via the syncytial blastoderm; peripheral nervous system development; multicellular organism aging. 160 alleles are reported. The phenotypes of these alleles manifest in: plasma membrane bounded cell projection; midgut primordium; neuromuscular junction; external encapsulating structure; dendritic tree. The phenotypic classes of alleles include: cell death defective; phenotype; visible; size defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 06-18 hour embryonic stages, during late larval stages, during early pupal stages.
- Full Name
Ecdysone receptor
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 10
- Biotypes
- 4
- Peaks
- 92,087
- Non-redundant peaks
- 57,228
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
Datasets Table for EcR
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
EcR | Schneider-2 | GEO | Drosophila melanogaster | GSE122810 | 712 | |||
EcR | Schneider-2 | GEO | Drosophila melanogaster | GSE139316 | 705 | |||
EcR | adult | wing | GEO | Drosophila melanogaster | GSE125604 | 4,374 | ||
EcR | adult | whole-fly_insertion | ENCODE | Drosophila melanogaster | ENCSR497FYG | 28,901 | ||
EcR | adult | whole-fly_insertion | ENCODE | Drosophila melanogaster | ENCSR377EUZ | 19,681 | ||
EcR | adult | whole-fly_insertion | ENCODE | Drosophila melanogaster | ENCSR566ZYE | 24,337 | ||
EcR | Kc167 | 20-HE | GEO | Drosophila melanogaster | GSE118047 | 1,973 | ||
EcR | Kc167 | GEO | Drosophila melanogaster | GSE118047 | 3,441 | |||
EcR | prepupa | WPP | GEO | Drosophila melanogaster | GSE20000 | 4,435 | ||
EcR | prepupa | WPP30-33 | GEO | Drosophila melanogaster | GSE20000 | 3,528 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |