FOXA1-2

Information FOXA1-2

Description

Targets both FOXA1 and 2. Hepatocyte nuclear factor 3-alpha. Transcription factor that is involved in embryonic development, establishment of tissue-specific gene expression and regulation of gene expression in differentiated tissues. Is thought to act as a 'pioneer' factor opening the compacted chromatin for other proteins through interactions with nucleosomal core histones and thereby replacing linker histones at target enhancer and/or promoter sites. Binds DNA with the consensus sequence 5'-[AC]A[AT]T[AG]TT[GT][AG][CT]T[CT]-3' (By similarity). Proposed to play a role in translating the epigenetic signatures into cell type-specific enhancer-driven transcriptional programs. Involved in the development of multiple endoderm-derived organ systems such as the liver, pancreas, lungs and prostate; FOXA1 and FOXA2 seem to have at least in part redundant roles. Plays a role in prostate morphogenesis and epithelial cell differentiation. FOXA1 and FOXA2 are essential for hepatic specification. FOXA1 and FOXA2 are required for morphogenesis and cell differentiation during formation of the lung. FOXA1 and FOXA2 are involved in bile duct formation; they positively regulate the binding of glucocorticoid receptor/NR3C1 to the IL6 promoter. FOXA1 and FOXA2 regulate multiple phases of midbrain dopaminergic neuron development; they regulate expression of NEUROG2 at the beginning of mDA neurogenesis and of NR4A2 and EN1 in immature mDA neurons. Modulates the transcriptional activity of nuclear hormone receptors. Is involved in ESR1-mediated transcription. Inhibits NKX2-1-mediated transcription from the SFTPC promoter in lung epithel independently from DNA-binding. Involved in regulation of apoptosis. Involved in cell cycle regulation. Originally described as a transcription activator for a number of liver genes such as AFP, albumin, tyrosine aminotransferase, PEPCK, etc. Interacts with the cis-acting regulatory regions of these genes. Involved in glucose homeostasis; activates the GCG promoter. (Source UniProtKB)

Full Name

FOXA1-2

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
51,996
Non-redundant peaks
39,557

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

JASPAR
MGI
Ensembl
UniProt
P35582
Genevisible
P35582
RefSeq
Aliases
All peaks FOXA1-2
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Non redundant peaks FOXA1-2
Download BED file
SEQUENCES FOXA1-2
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Datasets Table for FOXA1-2

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
FOXA1-2 lung-adenocarcinoma NKX2-neg GEO Mus musculus GSE43252 20,403
FOXA1-2 lung-adenocarcinoma NKX2-pos GEO Mus musculus GSE43252 31,593
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks