FOXA1
Information FOXA1
- Description
Transcription factor that is involved in embryonic development, establishment of tissue-specific gene expression and regulation of gene expression in differentiated tissues. Is thought to act as a 'pioneer' factor opening the compacted chromatin for other proteins through interactions with nucleosomal core histones and thereby replacing linker histones at target enhancer and/or promoter sites. Binds DNA with the consensus sequence 5'-[AC]A[AT]T[AG]TT[GT][AG][CT]T[CT]-3' (By similarity). Proposed to play a role in translating the epigenetic signatures into cell type-specific enhancer-driven transcriptional programs. Involved in the development of multiple endoderm-derived organ systems such as the liver, pancreas, lungs and prostate; FOXA1 and FOXA2 seem to have at least in part redundant roles. Plays a role in prostate morphogenesis and epithelial cell differentiation. FOXA1 and FOXA2 are essential for hepatic specification. FOXA1 and FOXA2 are required for morphogenesis and cell differentiation during formation of the lung. FOXA1 and FOXA2 are involved in bile duct formation; they positively regulate the binding of glucocorticoid receptor/NR3C1 to the IL6 promoter. FOXA1 and FOXA2 regulate multiple phases of midbrain dopaminergic neuron development; they regulate expression of NEUROG2 at the beginning of mDA neurogenesis and of NR4A2 and EN1 in immature mDA neurons. Modulates the transcriptional activity of nuclear hormone receptors. Is involved in ESR1-mediated transcription. Inhibits NKX2-1-mediated transcription from the SFTPC promoter in lung epithel independently from DNA-binding. Involved in regulation of apoptosis. Involved in cell cycle regulation. Originally described as a transcription activator for a number of liver genes such as AFP, albumin, tyrosine aminotransferase, PEPCK, etc. Interacts with the cis-acting regulatory regions of these genes. Involved in glucose homeostasis; activates the GCG promoter. {ECO:0000250, ECO:0000269|PubMed:10049364, ECO:0000269|PubMed:11864602, ECO:0000269|PubMed:15668254, ECO:0000269|PubMed:15748903, ECO:0000269|PubMed:15959514, ECO:0000269|PubMed:15987773, ECO:0000269|PubMed:17596284, ECO:0000269|PubMed:19141476, ECO:0000269|PubMed:19436110}.(Source UnitProtKB).
- Full Name
forkhead box A1
Source UniprotKB
- Species
Mus musculus [tax_id: 10090]
- Genome
mm10
ReMap Statistics
- Datasets
- 21
- Biotypes
- 8
- Peaks
- 567,270
- Non-redundant peaks
- 190,462
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 15375
- Official Gene Name
- Foxa1
- JASPAR
- MGI
- MGI:1347472
- Ensembl
- ENSMUSG00000035451
- UniProt
- P35582
- Genevisible
- P35582
- RefSeq
- NM_008259
- Aliases
- Hnf-3a; Hnf3a; Tcf-3a; Tcf3a
Datasets Table for FOXA1
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
FOXA1 | primary-tumor-organoid | T3 | GEO | Mus musculus | GSE99284 | 49,451 | ||
FOXA1 | primary-tumor-organoid | T6 | GEO | Mus musculus | GSE99284 | 33,545 | ||
FOXA1 | primary-tumor-organoid | T23 | GEO | Mus musculus | GSE99284 | 65,868 | ||
FOXA1 | primary-tumor-organoid | KPC-2D-emp | GEO | Mus musculus | GSE99284 | 23,886 | ||
FOXA1 | liver | GEO | Mus musculus | GSE33666 | 2,958 | |||
FOXA1 | liver | GEO | Mus musculus | GSE106379 | 50,393 | |||
FOXA1 | liver | GEO | Mus musculus | GSE17067 | 1,355 | |||
FOXA1 | liver | C3 | GEO | Mus musculus | GSE106379 | 50,393 | ||
FOXA1 | prostate | Foxa1-R219S | GEO | Mus musculus | GSE128867 | 1,532 | ||
FOXA1 | prostate | Foxa1-FE255del | GEO | Mus musculus | GSE128867 | 1,521 | ||
FOXA1 | prostate | Foxa1-overexpression | GEO | Mus musculus | GSE128867 | 10,705 | ||
FOXA1 | peritoneum-metastasis | M3P | GEO | Mus musculus | GSE99284 | 54,909 | ||
FOXA1 | liver-metastasis | M1L | GEO | Mus musculus | GSE99284 | 67,050 | ||
FOXA1 | intestinal-villus-cell | EED-ko-d11 | GEO | Mus musculus | GSE111024 | 60,942 | ||
FOXA1 | sperm | GEO | Mus musculus | GSE116855 | 8,835 | |||
FOXA1 | intestinal-villus-cell | GEO | Mus musculus | GSE111024 | 8,451 | |||
FOXA1 | peritoneum-metastasis | M10P | GEO | Mus musculus | GSE99284 | 33,170 | ||
FOXA1 | embryonic-carcinoma | RA-48h | GEO | Mus musculus | GSE82314 | 6,550 | ||
FOXA1 | liver-metastasis | M1L-shRen | GEO | Mus musculus | GSE99284 | 1,163 | ||
FOXA1 | liver-metastasis | M1L-shFoxa | GEO | Mus musculus | GSE99284 | 3,618 | ||
FOXA1 | primary-tumor-organoid | FOXA1 | GEO | Mus musculus | GSE99284 | 30,975 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |