FOXA1

Information FOXA1

Description

This gene encodes a member of the forkhead class of DNA-binding proteins. These hepatocyte nuclear factors are transcriptional activators for liver-specific transcripts such as albumin and transthyretin, and they also interact with chromatin. Similar family members in mice have roles in the regulation of metabolism and in the differentiation of the pancreas and liver. [provided by RefSeq, Jul 2008]

Full Name

forkhead box A1

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
241
Biotypes
34
Peaks
8,409,454
Non-redundant peaks
799,074

TF Classification

Super Class
Helix-turn-helix domains
Class
Fork head / winged helix factors
Familly
Forkhead box (FOX) factors
Sub Familly
FOXA

Source TFClass

External IDs

NCBI Gene
3169
Official Gene Name
FOXA1
JASPAR
MA0148
Ensembl
ENSG00000129514
UniProt
P55317
Genevisible
P55317
RefSeq
NM_004496
Aliases
HNF3A; TCF3A
All peaks FOXA1
Download BED file
Non redundant peaks FOXA1
Download BED file
SEQUENCES FOXA1
Download FASTA file
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Datasets Table for FOXA1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
FOXA1 MCF-7 4OH-Tam GEO Homo sapiens GSE75201 55,123
FOXA1 MCF-7 1117 GEO Homo sapiens GSE124667 29,720
FOXA1 MCF-7 1118 GEO Homo sapiens GSE124667 19,955
FOXA1 MCF-7 GEO Homo sapiens GSE72249 65,740
FOXA1 MCF-7 ETOH GEO Homo sapiens GSE23852 60,158
FOXA1 MCF-7 FOXA1 GEO Homo sapiens GSE124667 7,790
FOXA1 MCF-7 E2 GEO Homo sapiens GSE60270 77,717
FOXA1 MCF-7 E2 GEO Homo sapiens GSE72249 62,132
FOXA1 MCF-7 GEO Homo sapiens GSE59530 31,688
FOXA1 MCF-7 GEO Homo sapiens GSE81714 58,968
FOXA1 MCF-7 GEO Homo sapiens GSE80808 39,207
FOXA1 MCF-7 E2_TNF GEO Homo sapiens GSE59530 32,024
FOXA1 MCF-7 ESR1 GEO Homo sapiens GSE124667 8,569
FOXA1 MCF-7 ESR2 GEO Homo sapiens GSE124667 8,841
FOXA1 MCF-7 DSG GEO Homo sapiens GSE114737 16,601
FOXA1 MCF-7 DOX-neg GEO Homo sapiens GSE124654 34,373
FOXA1 MCF-7 shNR2F2 GEO Homo sapiens GSE132432 11,333
FOXA1 MCF-7 TamR GEO Homo sapiens GSE128445 28,153
FOXA1 MCF-7 GEO Homo sapiens GSE140185 37,939
FOXA1 MCF-7 FA GEO Homo sapiens GSE114737 9,370
FOXA1 MCF-7 estrogen_ab1 GEO Homo sapiens GSE112969 33,857
FOXA1 MCF-7 JC4692 GEO Homo sapiens GSE126004 57,679
FOXA1 MCF-7 JC4693 GEO Homo sapiens GSE126004 55,002
FOXA1 MCF-7 JC4690 GEO Homo sapiens GSE126004 63,608
FOXA1 MCF-7 JC4691 GEO Homo sapiens GSE126004 46,500
FOXA1 MCF-7 JC4696 GEO Homo sapiens GSE126004 39,171
FOXA1 MCF-7 JC4697 GEO Homo sapiens GSE126004 46,295
FOXA1 MCF-7 JC4694 GEO Homo sapiens GSE126004 34,199
FOXA1 MCF-7 JC4695 GEO Homo sapiens GSE126004 38,165
FOXA1 MCF-7 estrogen_ab2 GEO Homo sapiens GSE112969 64,876
FOXA1 MCF-7 GEO Homo sapiens GSE95302 13,902
FOXA1 MCF-7 shCTRL GEO Homo sapiens GSE132432 7,469
FOXA1 MCF-7 ARID1A-KO GEO Homo sapiens GSE140185 15,719
FOXA1 MCF-7 siFEN1 GEO Homo sapiens GSE95302 21,314
FOXA1 MCF-7 GEO Homo sapiens GSE128445 17,889
FOXA1 MCF-7 vehicle_ab1 GEO Homo sapiens GSE112969 39,598
FOXA1 MCF-7 vehicle_ab2 GEO Homo sapiens GSE112969 71,932
FOXA1 LAPC-4 CST_p358fs-V5 GEO Homo sapiens GSE123618 7,755
FOXA1 LAPC-4 TFS_p358fs-V5 GEO Homo sapiens GSE123618 77,330
FOXA1 LAPC-4 TFS GEO Homo sapiens GSE123618 6,075
FOXA1 LAPC-4 CST_DHT GEO Homo sapiens GSE123618 47,985
FOXA1 LAPC-4 TFS_DHT GEO Homo sapiens GSE123618 1,952
FOXA1 LAPC-4 CST_V5 GEO Homo sapiens GSE123618 20,372
FOXA1 HEC-1-A GEO Homo sapiens GSE100789 2,264
FOXA1 ZR-75-1 vehicle_ab1 GEO Homo sapiens GSE112969 31,209
FOXA1 ZR-75-1 vehicle_ab2 GEO Homo sapiens GSE112969 68,912
FOXA1 ZR-75-1 estrogen_ab1 GEO Homo sapiens GSE112969 28,653
FOXA1 ZR-75-1 estrogen_ab2 GEO Homo sapiens GSE112969 61,069
FOXA1 HEK293 r261g_TFS GEO Homo sapiens GSE123618 51,862
FOXA1 HEK293 i176m_TFS GEO Homo sapiens GSE123618 46,836
FOXA1 HEK293 v5_TFS GEO Homo sapiens GSE123618 9,637
FOXA1 HEK293 eGFP_TFS GEO Homo sapiens GSE123618 3,968
FOXA1 ZR751 E2 GEO Homo sapiens GSE72249 67,746
FOXA1 ZR751 GEO Homo sapiens GSE72249 79,737
FOXA1 ZR751 DEX GEO Homo sapiens GSE72249 76,290
FOXA1 DU145 GEO Homo sapiens GSE47987 4,223
FOXA1 22Rv1 R1881 GEO Homo sapiens GSE80742 45,487
FOXA1 22Rv1 EtOH GEO Homo sapiens GSE80742 25,345
FOXA1 22Rv1 GEO Homo sapiens GSE85558 23,686
FOXA1 22Rv1 GEO Homo sapiens GSE96652 58,259
FOXA1 22Rv1 Dox GEO Homo sapiens GSE85558 48,167
FOXA1 22Rv1 TFS_Crispr_WT3 GEO Homo sapiens GSE123618 29,713
FOXA1 22Rv1 CST_Crispr-36 GEO Homo sapiens GSE123618 58,895
FOXA1 22Rv1 CST GEO Homo sapiens GSE123618 48,206
FOXA1 22Rv1 i176m_CST GEO Homo sapiens GSE123618 64,481
FOXA1 22Rv1 TFS_Crispr-70 GEO Homo sapiens GSE123618 1,768
FOXA1 22Rv1 CST_Crispr_WT3 GEO Homo sapiens GSE123618 59,083
FOXA1 22Rv1 TFS GEO Homo sapiens GSE123618 20,729
FOXA1 22Rv1 CST_Crispr GEO Homo sapiens GSE123618 75,067
FOXA1 22Rv1 TFS_Crispr-36 GEO Homo sapiens GSE123618 12,582
FOXA1 22Rv1 CST GEO Homo sapiens GSE129951 54,694
FOXA1 22Rv1 ab GEO Homo sapiens GSE129951 10,956
FOXA1 22Rv1 TFS_Crispr GEO Homo sapiens GSE123618 7,863
FOXA1 22Rv1 CST_Crispr-70 GEO Homo sapiens GSE123618 73,899
FOXA1 22Rv1 r261g_CST GEO Homo sapiens GSE123618 73,099
FOXA1 VCaP DHT24H GEO Homo sapiens GSE58428 65,716
FOXA1 VCaP ETOH24H GEO Homo sapiens GSE58428 48,870
FOXA1 MCF-7 E2 GEO Homo sapiens GSE59530 33,650
FOXA1 MCF-7 DEX GEO Homo sapiens GSE72249 60,671
FOXA1 MCF-7 GEO Homo sapiens GSE60270 22,002
FOXA1 MCF-7 E2 GEO Homo sapiens GSE23852 67,736
FOXA1 PDAC GEO Homo sapiens GSE64557 49,081
FOXA1 PDAC SHCTR GEO Homo sapiens GSE64557 48,010
FOXA1 PDAC KOKLF5 GEO Homo sapiens GSE64557 49,990
FOXA1 LNCaP-abl GEO Homo sapiens GSE63034 71,936
FOXA1 CFPAC-1 FOXA1-KO GEO Homo sapiens GSE119930 38,691
FOXA1 CFPAC-1 FOXA2-KO GEO Homo sapiens GSE119930 70,624
FOXA1 CFPAC-1 GEO Homo sapiens GSE119930 73,375
FOXA1 T-47D DMSO GEO Homo sapiens GSE84593 63,519
FOXA1 T-47D flp-ctrl GEO Homo sapiens GSE99479 36,961
FOXA1 T-47D DEX GEO Homo sapiens GSE72249 21,675
FOXA1 T-47D E2 GEO Homo sapiens GSE72249 20,749
FOXA1 T-47D GEO Homo sapiens GSE72249 26,663
FOXA1 T-47D CR3flp GEO Homo sapiens GSE99479 76,346
FOXA1 T-47D shRNF2_8h GEO Homo sapiens GSE137579 64,779
FOXA1 T-47D 8h GEO Homo sapiens GSE137579 60,806
FOXA1 T-47D shRNF2 GEO Homo sapiens GSE137579 67,667
FOXA1 T-47D JC4744 GEO Homo sapiens GSE126004 34,846
FOXA1 T-47D JC4745 GEO Homo sapiens GSE126004 53,954
FOXA1 T-47D JC4746 GEO Homo sapiens GSE126004 11,847
FOXA1 T-47D JC4747 GEO Homo sapiens GSE126004 70,376
FOXA1 T-47D JC4742 GEO Homo sapiens GSE126004 38,637
FOXA1 T-47D JC4743 GEO Homo sapiens GSE126004 55,711
FOXA1 T-47D JC4748 GEO Homo sapiens GSE126004 78,491
FOXA1 T-47D shRNF2_24h GEO Homo sapiens GSE137579 54,785
FOXA1 T-47D shRNF2_45min GEO Homo sapiens GSE137579 62,551
FOXA1 LNCaP GEO Homo sapiens GSE56288 31,209
FOXA1 LNCaP GEO Homo sapiens GSE52725 43,431
FOXA1 LNCaP DHT24H GEO Homo sapiens GSE58428 25,204
FOXA1 LNCaP GEO Homo sapiens GSE64656 78,150
FOXA1 LNCaP R1881 GEO Homo sapiens GSE69043 75,507
FOXA1 LNCaP ETOH GEO Homo sapiens GSE69043 1,611
FOXA1 LNCaP 1F5 GEO Homo sapiens GSE30623 37,844
FOXA1 LNCaP SHGATA2_ETOH GEO Homo sapiens GSE69043 145
FOXA1 LNCaP ETOH24H GEO Homo sapiens GSE58428 73,317
FOXA1 LNCaP 1F5_SIFOXA1 GEO Homo sapiens GSE30623 9,934
FOXA1 LNCaP SHGATA2_R1881 GEO Homo sapiens GSE69043 45,804
FOXA1 LNCaP FA GEO Homo sapiens GSE114737 18,838
FOXA1 LNCaP VEH GEO Homo sapiens GSE114266 51,206
FOXA1 LNCaP TFS GEO Homo sapiens GSE123618 57,363
FOXA1 LNCaP F266S_shFOXA1 GEO Homo sapiens GSE128883 68,501
FOXA1 LNCaP DSG GEO Homo sapiens GSE114737 45,582
FOXA1 LNCaP GSK-48H GEO Homo sapiens GSE114266 13,132
FOXA1 LNCaP D226G GEO Homo sapiens GSE133386 1,343
FOXA1 LNCaP GFP_shFOXA1_Ethanol GEO Homo sapiens GSE128883 3,873
FOXA1 LNCaP UPF1069 GEO Homo sapiens GSE114274 18,268
FOXA1 LNCaP GFP_shFOXA1 GEO Homo sapiens GSE128883 4,204
FOXA1 LNCaP S2101-4H GEO Homo sapiens GSE114266 28,493
FOXA1 LNCaP FENG_shFOXA1_Ethanol GEO Homo sapiens GSE128883 61,294
FOXA1 LNCaP GSK GEO Homo sapiens GSE148926 25,628
FOXA1 LNCaP DMSO GEO Homo sapiens GSE114274 24,636
FOXA1 LNCaP GFP_Ethanol GEO Homo sapiens GSE128883 906
FOXA1 LNCaP L388M_shFOXA1 GEO Homo sapiens GSE128883 36,901
FOXA1 LNCaP G87R_shFOXA1 GEO Homo sapiens GSE128883 52,460
FOXA1 LNCaP GSK-4H GEO Homo sapiens GSE114266 3,245
FOXA1 LNCaP GFP GEO Homo sapiens GSE128883 3,061
FOXA1 LNCaP S2101-48H GEO Homo sapiens GSE114266 26,687
FOXA1 LNCaP M253K GEO Homo sapiens GSE133386 45,010
FOXA1 T-47D E2_TAM ENA Homo sapiens ERP000380 51,544
FOXA1 MCF-7 E2_TAM ENA Homo sapiens ERP000380 59,068
FOXA1 MCF-7 TAMR_E2_TAM ENA Homo sapiens ERP000380 44,160
FOXA1 MCF-7 ENA Homo sapiens ERP001226 77,991
FOXA1 MCF-7 ENCODE Homo sapiens ENCSR126YEB 49,178
FOXA1 MCF-7 ENA Homo sapiens ERP000380 53,314
FOXA1 MCF-7 GEO Homo sapiens GSE124667 18,753
FOXA1 K-562 ENCODE Homo sapiens ENCSR819LHG 332
FOXA1 Hep-G2 ENCODE Homo sapiens ENCSR267DFA 7,828
FOXA1 A-549 ENCODE Homo sapiens ENCSR000BRD 39,537
FOXA1 A-549 ENCODE Homo sapiens ENCSR000BPX 63,573
FOXA1 ZR751 E2_TAM ENA Homo sapiens ERP000380 65,607
FOXA1 LNCaP SHFOXA1_R1881 GEO Homo sapiens GSE37345 79,527
FOXA1 LNCaP DHT GEO Homo sapiens GSE28264 48,486
FOXA1 liver ENCODE Homo sapiens ENCSR735KEY 19,244
FOXA1 liver ENA Homo sapiens ERP002306 49,212
FOXA1 liver ENCODE Homo sapiens ENCSR324RCI 22,512
FOXA1 Ishikawa ENCODE Homo sapiens ENCSR000BKW 6,181
FOXA1 HEK293T ENCODE Homo sapiens ENCSR094WHO 518
FOXA1 MCF-7 CTCF2_FOXA1 GEO Homo sapiens GSE124667 8,455
FOXA1 MCF-7 TNF GEO Homo sapiens GSE59530 38,057
FOXA1 LS180 GEO Homo sapiens GSE140533 54,649
FOXA1 breast tumor_Male_14 GEO Homo sapiens GSE104399 48,958
FOXA1 breast tumor_Male_4 GEO Homo sapiens GSE104399 26,879
FOXA1 breast tumor_Male_6 GEO Homo sapiens GSE104399 6,943
FOXA1 breast tumor_Male_1 GEO Homo sapiens GSE104399 15,968
FOXA1 breast tumor_Male_3 GEO Homo sapiens GSE104399 18,837
FOXA1 breast tumor_Female_2 GEO Homo sapiens GSE104399 34,526
FOXA1 breast tumor_Male_19 GEO Homo sapiens GSE104399 31,578
FOXA1 breast tumor_Male_13 GEO Homo sapiens GSE104399 27,206
FOXA1 breast tumor_Female_1 GEO Homo sapiens GSE104399 22,442
FOXA1 breast tumor_Female_3 GEO Homo sapiens GSE104399 13,633
FOXA1 breast tumor_Female_7 GEO Homo sapiens GSE104399 6,415
FOXA1 breast tumor_Female_6 GEO Homo sapiens GSE104399 3,658
FOXA1 Huh-7 MITO GEO Homo sapiens GSE39241 60
FOXA1 Huh-7 ASYNC GEO Homo sapiens GSE39241 5,115
FOXA1 NCI-H3122 GEO Homo sapiens GSE39998 48,899
FOXA1 prostate P29_T GEO Homo sapiens GSE130408 25,033
FOXA1 prostate 2030 GEO Homo sapiens GSE130408 32,348
FOXA1 prostate 2030_T GEO Homo sapiens GSE130408 66,513
FOXA1 prostate P1_T GEO Homo sapiens GSE130408 26,536
FOXA1 prostate P7_T GEO Homo sapiens GSE130408 46,507
FOXA1 prostate P23_T GEO Homo sapiens GSE130408 52,772
FOXA1 prostate 2483_T GEO Homo sapiens GSE130408 41,369
FOXA1 prostate P13 GEO Homo sapiens GSE130408 6,977
FOXA1 prostate P19 GEO Homo sapiens GSE130408 20,166
FOXA1 prostate P5 GEO Homo sapiens GSE130408 5,671
FOXA1 prostate P7 GEO Homo sapiens GSE130408 6,232
FOXA1 prostate P1 GEO Homo sapiens GSE130408 14,702
FOXA1 prostate P5_T GEO Homo sapiens GSE130408 63,827
FOXA1 prostate P27_T GEO Homo sapiens GSE130408 37,879
FOXA1 prostate P19_T GEO Homo sapiens GSE130408 22,674
FOXA1 prostate 2484 GEO Homo sapiens GSE130408 16,924
FOXA1 prostate 2480 GEO Homo sapiens GSE130408 66,150
FOXA1 prostate 2483 GEO Homo sapiens GSE130408 24,614
FOXA1 prostate 2484_T GEO Homo sapiens GSE130408 12,219
FOXA1 prostate P13_T GEO Homo sapiens GSE130408 37,430
FOXA1 prostate 2078_T GEO Homo sapiens GSE130408 45,924
FOXA1 prostate P29 GEO Homo sapiens GSE130408 16,466
FOXA1 prostate P23 GEO Homo sapiens GSE130408 6,929
FOXA1 prostate P27 GEO Homo sapiens GSE130408 5,542
FOXA1 prostate P25 GEO Homo sapiens GSE130408 5,057
FOXA1 prostate 2078 GEO Homo sapiens GSE130408 20,781
FOXA1 prostate tumor_tissue4 GEO Homo sapiens GSE114385 615
FOXA1 prostate tumor_tissue1 GEO Homo sapiens GSE114385 1,186
FOXA1 prostate tumor_tissue3 GEO Homo sapiens GSE114385 2,113
FOXA1 prostate tumor_tissue2 GEO Homo sapiens GSE114385 621
FOXA1 primary-breast-cancer B2_DSG GEO Homo sapiens GSE114737 57,374
FOXA1 primary-breast-cancer B4_DSG GEO Homo sapiens GSE114737 19,608
FOXA1 primary-breast-cancer B1_DSG GEO Homo sapiens GSE114737 35,702
FOXA1 prostate-cancer PDX_189-3 GEO Homo sapiens GSE130408 79,765
FOXA1 prostate-cancer PDX_136 GEO Homo sapiens GSE130408 52,177
FOXA1 T47D-A1-2 EtOH GEO Homo sapiens GSE112491 2,772
FOXA1 T47D-A1-2 Dex GEO Homo sapiens GSE112491 6,726
FOXA1 MCF-7-TAMR-1 4OH-Tam GEO Homo sapiens GSE75201 66,796
FOXA1 primary-prostate-cancer P2_DSG GEO Homo sapiens GSE114737 66,763
FOXA1 primary-prostate-cancer G1_DSG GEO Homo sapiens GSE114737 11,232
FOXA1 primary-prostate-cancer G2_DSG GEO Homo sapiens GSE114737 53,634
FOXA1 primary-prostate-cancer P1_DSG GEO Homo sapiens GSE114737 12,438
FOXA1 primary-prostate-cancer P3_DSG GEO Homo sapiens GSE114737 7,398
FOXA1 primary-prostate-cancer P4_DSG GEO Homo sapiens GSE114737 10,167
FOXA1 breast-cancer ENOB-2849 GEO Homo sapiens GSE128018 32,302
FOXA1 breast-cancer ENOB-2848 GEO Homo sapiens GSE128018 19,059
FOXA1 breast-cancer Veh-2856 GEO Homo sapiens GSE128018 64,348
FOXA1 breast-cancer Veh-2858 GEO Homo sapiens GSE128018 40,176
FOXA1 breast-cancer heregulin-ICI GEO Homo sapiens GSE101407 17,053
FOXA1 breast-cancer 3487 GEO Homo sapiens GSE126004 23,956
FOXA1 breast-cancer ENOB-2852 GEO Homo sapiens GSE128018 26,659
FOXA1 breast-cancer Veh-2860 GEO Homo sapiens GSE128018 36,088
FOXA1 breast-cancer heregulin-Herceptin-ICI GEO Homo sapiens GSE101407 15,453
FOXA1 breast-cancer ICI GEO Homo sapiens GSE101407 10,732
FOXA1 breast-cancer Veh-131 GEO Homo sapiens GSE128018 15,390
FOXA1 breast-cancer heregulin GEO Homo sapiens GSE101407 44,054
FOXA1 breast-cancer Herceptin-ICI GEO Homo sapiens GSE101407 12,486
FOXA1 LNCaP-C4-2B DHT GEO Homo sapiens GSE40050 19,874
FOXA1 LNCaP-C4-2B GEO Homo sapiens GSE40050 12,292
FOXA1 LNCaP-C4-2B TFS GEO Homo sapiens GSE123618 38,025
FOXA1 LNCaP-C4-2B CST GEO Homo sapiens GSE123618 70,349
FOXA1 pancreatic-progenitor PP1 GEO Homo sapiens GSE104840 50,121
FOXA1 A1A3 Brg1KD_EtOH GEO Homo sapiens GSE112491 3,007
FOXA1 A1A3 Dex GEO Homo sapiens GSE112491 4,961
FOXA1 A1A3 Brg1KD_Dex GEO Homo sapiens GSE112491 4,211
FOXA1 A1A3 EtOH GEO Homo sapiens GSE112491 3,754
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks