FOXA2

Information FOXA2

Description

Transcription factor that is involved in embryonic development, establishment of tissue-specific gene expression and regulation of gene expression in differentiated tissues. Is thought to act as a 'pioneer' factor opening the compacted chromatin for other proteins through interactions with nucleosomal core histones and thereby replacing linker histones at target enhancer and/or promoter sites. Binds DNA with the consensus sequence 5'-[AC]A[AT]T[AG]TT[GT][AG][CT]T[CT]-3' (By similarity). In embryonic development is required for notochord formation. Involved in the development of multiple endoderm-derived organ systems such as the liver, pancreas and lungs; Foxa1 and Foxa2 seem to have at least in part redundant roles. FOXA1 and FOXA2 are essential for hepatic specification. FOXA1 and FOXA2 are required for morphogenesis and cell differentiation during formation of the lung. FOXA1 and FOXA2 are involved in bile duct formation; they positively regulate the binding glucocorticoid receptor/NR3C1 to the IL6 promoter. FOXA1 and FOXA2 regulate multiple phases of midbrain dopaminergic neuron development; they regulate expression of NEUROG2 at the beginning of mDA neurogenesis and of NR4A2 and EN1 in immature mDA neurons. Modulates the transcriptional activity of nuclear hormone receptors; inhibits AR-mediated transcription from the LCN5 promoter. Binds to fibrinogen beta promoter and is involved in IL6-induced fibrinogen beta transcriptional activation. Originally described as a transcription activator for a number of liver genes such as AFP, albumin, tyrosine aminotransferase, PEPCK, etc. Interacts with the cis-acting regulatory regions of these genes. Involved in glucose homeostasis; regulates the expression of genes important for glucose sensing in pancreatic beta-cells and glucose homeostasis. In pancreatic beta cells activates transcription of potassium channel subunits KCNJ11 and ABCC8. Involved in regulation of fat metabolism; activates transcriptional programs of lipid metabolism and ketogenesis at low insulin state. Involved in transcriptional regulation of MUC2 in the intestine. {ECO:0000250, ECO:0000269|PubMed:11445544, ECO:0000269|PubMed:11875061, ECO:0000269|PubMed:15616563, ECO:0000269|PubMed:15668254, ECO:0000269|PubMed:15959514, ECO:0000269|PubMed:16740652, ECO:0000269|PubMed:17596284, ECO:0000269|PubMed:18336786, ECO:0000269|PubMed:19141476, ECO:0000269|PubMed:19436110, ECO:0000269|PubMed:8069909}.(Source UnitProtKB).

Full Name

forkhead box A2

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
15
Biotypes
4
Peaks
276,494
Non-redundant peaks
192,160

TF Classification

Familly
Fork head / winged helix factors
Sub Familly
Forkhead box (FOX) factors

Source JASPAR

External IDs

NCBI Gene
15376
Official Gene Name
Foxa2
JASPAR
MA0047.2
MGI
MGI:1347476
Ensembl
ENSMUSG00000037025
UniProt
P35583
Genevisible
P35583
RefSeq
NM_010446
Aliases
HNF3-beta; HNF3beta; Hnf-3b; Hnf3b; Tcf-3b; Tcf3b
All peaks FOXA2
Download BED file
Non redundant peaks FOXA2
Download BED file
SEQUENCES FOXA2
Download FASTA file
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Datasets Table for FOXA2

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
FOXA2 liver KO GEO Mus musculus GSE78177 2,621
FOXA2 liver 21months GEO Mus musculus GSE60393 21,926
FOXA2 liver GEO Mus musculus GSE26729 4,510
FOXA2 liver GEO Mus musculus GSE17067 3,085
FOXA2 liver GEO Mus musculus GSE78177 2,129
FOXA2 liver KO GEO Mus musculus GSE70346 2,448
FOXA2 liver GEO Mus musculus GSE54520 4,141
FOXA2 liver GEO Mus musculus GSE70346 2,516
FOXA2 mESC d3 GEO Mus musculus GSE116258 41,894
FOXA2 mESC d5 GEO Mus musculus GSE116258 53,224
FOXA2 mESC GEO Mus musculus GSE40423 7,779
FOXA2 mESC d1 GEO Mus musculus GSE116258 61,941
FOXA2 EBs GEO Mus musculus GSE42132 1,068
FOXA2 liver GEO Mus musculus GSE25836 1,676
FOXA2 pancreas GEO Mus musculus GSE47459 65,536
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks