HDAC1

Information HDAC1

Description

The gene Histone deacetylase 1 is referred to in FlyBase by the symbol DmelHDAC1 (CG7471, FBgn0015805). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is 3L:4626734..4629467. Its molecular function is described by: protein binding; histone deacetylase activity; transcription corepressor activity. It is involved in the biological process described with 23 unique terms, many of which group under: gamete generation; smoothened signaling pathway; locomotion; regulation of neural precursor cell proliferation; segmentation. 39 alleles are reported. The phenotypes of these alleles manifest in: embryonic epidermis; reproductive system; chromosome; digestive system; fat body. The phenotypic classes of alleles include: phenotype; some die during P-stage; increased mortality during development; lethal - all die before end of second instar larval stage. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.

Full Name

Histone deacetylase 1

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
33,308
Non-redundant peaks
27,603

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
38565
Official Gene Name
HDAC1
JASPAR
Ensembl
FBgn0015805
UniProt
Q94517
Genevisible
Q94517
RefSeq
NM_139661
Aliases
HDAC1
All peaks HDAC1
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Non redundant peaks HDAC1
Download BED file
SEQUENCES HDAC1
Download FASTA file
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Datasets Table for HDAC1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
HDAC1 mushroom-body light_homemade GEO Drosophila melanogaster GSE150642 26,769
HDAC1 mushroom-body naive_homemade GEO Drosophila melanogaster GSE150642 6,539
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks