HMGA1

Information HMGA1

Description

This locus encodes a member of the nuclear, non-histone high mobility group protein family. This architectural transcription factor binds to A-T rich DNA sequences and participates in enhanceosome formation, chromatin remodeling and regulation of transcription. This protein functions in many cellular processes, including cell growth and differentiation. Alternatively spliced transcript variants have been described. [provided by RefSeq, Oct 2009]

Full Name

high mobility group AT-hook 1

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
4
Biotypes
2
Peaks
135,553
Non-redundant peaks
103,857

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
15361
Official Gene Name
Hmga1
JASPAR
MGI
MGI:96160
Ensembl
ENSMUSG00000046711
UniProt
P17095
Genevisible
P17095
RefSeq
NM_016660
Aliases
AL023995; HMG-I(Y); HMGI(Y); HMGY; Hmga1a; Hmga1b; Hmgi; Hmgiy; Hmgy
All peaks HMGA1
Download BED file
Non redundant peaks HMGA1
Download BED file
SEQUENCES HMGA1
Download FASTA file
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Datasets Table for HMGA1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
HMGA1 DBD-mut NPC mut GEO Mus musculus GSE100405 20,391
HMGA1 NPC GEO Mus musculus GSE100405 33,881
HMGA1 mESC hmga1KO-hmga2 GEO Mus musculus GSE100405 36,500
HMGA1 mut mESC mut GEO Mus musculus GSE100405 44,781
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks