HOXA9

Information HOXA9

Description

This gene is located in a cluster of developmentally and temporally regulated genes on chromosome 6 encoding proteins involved in pattern formation. These proteins contain a characteristic DNA-binding motif called a homeodomain and function in transcriptional regulation. There are four distinct clusters of similar genes on chromosomes 2, 6, 11, and 15. The protein encoded by this gene is important for hematopoeisis. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2013]

Full Name

homeobox A9

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
3
Biotypes
2
Peaks
19,852
Non-redundant peaks
14,770

TF Classification

Familly
Homeo domain factors
Sub Familly
HOX-related factors

Source JASPAR

External IDs

NCBI Gene
15405
Official Gene Name
Hoxa9
JASPAR
MA0594.1
MGI
MGI:96180
Ensembl
ENSMUSG00000038227
UniProt
P09631
Genevisible
P09631
RefSeq
NM_010456
Aliases
D6a9; Hox-1.7
All peaks HOXA9
Download BED file
Non redundant peaks HOXA9
Download BED file
SEQUENCES HOXA9
Download FASTA file
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Datasets Table for HOXA9

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
HOXA9 AML GEO Mus musculus GSE48679 3,102
HOXA9 AML Hoxa9-only GEO Mus musculus GSE48679 13,201
HOXA9 hematopoietic-progenitor GEO Mus musculus GSE58361 3,549
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks