Hsf

Information Hsf

Description

The gene Heat shock factor is referred to in FlyBase by the symbol DmelHsf (CG5748, FBgn0001222). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (all unique). Gene sequence location is 2R:18130303..18134634. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; protein binding; DNA-binding transcription factor activity; DNA binding; sequence-specific DNA binding. It is involved in the biological process described with 8 unique terms, many of which group under: response to stress; response to stimulus; response to other organism; negative regulation of nucleic acid-templated transcription; response to temperature stimulus. 28 alleles are reported. The phenotypes of these alleles manifest in: egg chamber; salivary gland; nurse cell; ganglion mother cell; polytene chromosome. The phenotypic classes of alleles include: stress response defective; increased mortality during development; phenotype; lethal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages, during late pupal stages, in adult female stages.

Full Name

Heat shock factor

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
5
Biotypes
2
Peaks
22,757
Non-redundant peaks
21,775

TF Classification

Familly
Heat shock factors
Sub Familly
HSF factors

Source JASPAR

External IDs

NCBI Gene
37068
Official Gene Name
Hsf
JASPAR
MA1458.1
Ensembl
FBgn0001222
UniProt
P22813
Genevisible
P22813
RefSeq
NM_057227
Aliases
Hsf
All peaks Hsf
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Non redundant peaks Hsf
Download BED file
SEQUENCES Hsf
Download FASTA file
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Datasets Table for Hsf

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Hsf adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR189NRY 21,458
Hsf S2-DRSC GEO Drosophila melanogaster GSE19025 475
Hsf S2-DRSC KD GEO Drosophila melanogaster GSE19025 253
Hsf S2-DRSC NHS GEO Drosophila melanogaster GSE19025 257
Hsf S2-DRSC NHS_KD GEO Drosophila melanogaster GSE19025 314
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks