IKZF1

Information IKZF1

Description

This gene encodes a transcription factor that belongs to the family of zinc-finger DNA-binding proteins associated with chromatin remodeling. The expression of this protein is restricted to the fetal and adult hemo-lymphopoietic system, and it functions as a regulator of lymphocyte differentiation. Several alternatively spliced transcript variants encoding different isoforms have been described for this gene. Most isoforms share a common C-terminal domain, which contains two zinc finger motifs that are required for hetero- or homo-dimerization, and for interactions with other proteins. The isoforms, however, differ in the number of N-terminal zinc finger motifs that bind DNA and in nuclear localization signal presence, resulting in members with and without DNA-binding properties. Only a few isoforms contain the requisite three or more N-terminal zinc motifs that confer high affinity binding to a specific core DNA sequence element in the promoters of target genes. The non-DNA-binding isoforms are largely found in the cytoplasm, and are thought to function as dominant-negative factors. Overexpression of some dominant-negative isoforms have been associated with B-cell malignancies, such as acute lymphoblastic leukemia (ALL). [provided by RefSeq, May 2014]

Full Name

IKAROS family zinc finger 1

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
7
Biotypes
6
Peaks
183,943
Non-redundant peaks
147,952

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

NCBI Gene
10320
Official Gene Name
IKZF1
JASPAR
Ensembl
ENSG00000185811
UniProt
Q13422
Genevisible
Q13422
RefSeq
NM_001220765
Aliases
CVID13; Hs.54452; IK1; IKAROS; LYF1; LyF-1; PPP1R92; PRO0758; ZNFN1A1; hIk-1
All peaks IKZF1
Download BED file
Non redundant peaks IKZF1
Download BED file
SEQUENCES IKZF1
Download FASTA file
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Datasets Table for IKZF1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
IKZF1 HSPC GEO Homo sapiens GSE26014 1,682
IKZF1 K-562 ENCODE Homo sapiens ENCSR395HWC 72,259
IKZF1 Hep-G2 ENCODE Homo sapiens ENCSR278JQG 3,511
IKZF1 GM12878 ENCODE Homo sapiens ENCSR000EUJ 1,004
IKZF1 BCR-ABL1 LAX2 GEO Homo sapiens GSE58825 22,305
IKZF1 BCR-ABL1 GEO Homo sapiens GSE58825 7,932
IKZF1 pre-B-cell GEO Homo sapiens GSE107886 75,250
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks