JARID2

Information JARID2

Description

Regulator of histone methyltransferase complexes that plays an essential role in embryonic development, including heart and liver development, neural tube fusion process and hematopoiesis (PubMed:10807864, PubMed:12852854, PubMed:12890668, PubMed:15542826, PubMed:15870077, PubMed:19010785, PubMed:20064375, PubMed:20064376, PubMed:20075857). Acts as an accessory subunit for the core PRC2 (Polycomb repressive complex 2) complex, which mediates histone H3K27 (H3K27me3) trimethylation on chromatin (PubMed:20064376, PubMed:20064375). Binds DNA and mediates the recruitment of the PRC2 complex to target genes in embryonic stem cells, thereby playing a key role in stem cell differentiation and normal embryonic development (PubMed:20064375, PubMed:20075857). In cardiac cells, it is required to repress expression of cyclin-D1 (CCND1) by activating methylation of 'Lys-9' of histone H3 (H3K9me) by the GLP1/EHMT1 and G9a/EHMT2 histone methyltransferases (PubMed:12852854, PubMed:12890668, PubMed:19010785). Also acts as a transcriptional repressor of ANF via its interaction with GATA4 and NKX2-5 (PubMed:15542826). Participates in the negative regulation of cell proliferation signaling (PubMed:10913339). Does not have histone demethylase activity (PubMed:20064376). {ECO:0000269|PubMed:10807864, ECO:0000269|PubMed:10913339, ECO:0000269|PubMed:12852854, ECO:0000269|PubMed:12890668, ECO:0000269|PubMed:15542826, ECO:0000269|PubMed:15870077, ECO:0000269|PubMed:19010785, ECO:0000269|PubMed:20064375, ECO:0000269|PubMed:20064376, ECO:0000269|PubMed:20075857}.(Source UnitProtKB).

Full Name

jumonji, AT rich interactive domain 2

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
36
Biotypes
2
Peaks
249,587
Non-redundant peaks
93,755

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
16468
Official Gene Name
Jarid2
JASPAR
MGI
MGI:104813
Ensembl
ENSMUSG00000038518
UniProt
Q62315
Genevisible
Q62315
RefSeq
NM_021878
Aliases
Jmj; jumonji
All peaks JARID2
Download BED file
Non redundant peaks JARID2
Download BED file
SEQUENCES JARID2
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for JARID2

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
JARID2 mESC MTF2-GT GEO Mus musculus GSE94300 23,175
JARID2 mESC K116me2 GEO Mus musculus GSE55630 4,686
JARID2 mESC ctrl GEO Mus musculus GSE48122 10,981
JARID2 mESC Jarid2-shRNA GEO Mus musculus GSE19365 138
JARID2 mESC GEO Mus musculus GSE140546 10,798
JARID2 mESC OHT GEO Mus musculus GSE134053 5,537
JARID2 mESC PAR-48 GEO Mus musculus GSE134053 3,984
JARID2 mESC PARETA GEO Mus musculus GSE134053 9,921
JARID2 mESC TX1072 GEO Mus musculus GSE52073 1,810
JARID2 mESC I53SOHT GEO Mus musculus GSE134053 1,174
JARID2 mESC WT48 GEO Mus musculus GSE134053 7,838
JARID2 mESC GEO Mus musculus GSE132752 4,978
JARID2 mESC WTETA GEO Mus musculus GSE134053 9,254
JARID2 mESC GEO Mus musculus GSE52073 2,961
JARID2 mESC I53S48 GEO Mus musculus GSE134053 1,440
JARID2 mESC GEO Mus musculus GSE70974 3,762
JARID2 mESC GEO Mus musculus GSE127804 4,586
JARID2 mESC Rest-KO GEO Mus musculus GSE48122 17,390
JARID2 mESC GEO Mus musculus GSE94300 21,319
JARID2 mESC GEO Mus musculus GSE60397 10,980
JARID2 mESC GEO Mus musculus GSE19708 27,218
JARID2 mESC GEO Mus musculus GSE94429 5,207
JARID2 CD4-pos GEO Mus musculus GSE47528 1,224
JARID2 CD4-pos KO GEO Mus musculus GSE47528 4,654
JARID2 mESC PAR-72 GEO Mus musculus GSE134053 2,055
JARID2 mESC WT72 GEO Mus musculus GSE134053 7,643
JARID2 mESC SCR-shRNA GEO Mus musculus GSE19365 1,701
JARID2 mESC I53SETA GEO Mus musculus GSE134053 8,896
JARID2 mESC PCL1-3-KO GEO Mus musculus GSE127804 2,107
JARID2 mESC KO GEO Mus musculus GSE60397 8,849
JARID2 mESC GEO Mus musculus GSE55630 5,799
JARID2 mESC SUZ12-KO GEO Mus musculus GSE127804 221
JARID2 mESC I53S72 GEO Mus musculus GSE134053 466
JARID2 mESC Dox GEO Mus musculus GSE52073 2,466
JARID2 mESC TAM GEO Mus musculus GSE132752 1,634
JARID2 mESC KO GEO Mus musculus GSE140546 12,735
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks