JARID2

Information JARID2

Description

This gene encodes a Jumonji- and AT-rich interaction domain (ARID)-domain-containing protein. The encoded protein is a DNA-binding protein that functions as a transcriptional repressor. This protein interacts with the Polycomb repressive complex 2 (PRC2) which plays an essential role in regulating gene expression during embryonic development. This protein facilitates the recruitment of the PRC2 complex to target genes. Alternate splicing results in multiple transcript variants. Mutations in this gene are associated with chronic myeloid malignancies. [provided by RefSeq, May 2012]

Full Name

jumonji and AT-rich interaction domain containing 2

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
12
Biotypes
9
Peaks
100,533
Non-redundant peaks
63,016

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

NCBI Gene
3720
Official Gene Name
JARID2
JASPAR
Ensembl
ENSG00000008083
UniProt
Q92833
Genevisible
Q92833
RefSeq
NM_001267040
Aliases
JMJ
All peaks JARID2
Download BED file
Non redundant peaks JARID2
Download BED file
SEQUENCES JARID2
Download FASTA file
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Datasets Table for JARID2

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
JARID2 AMIPS6 GEO Homo sapiens GSE48516 11,332
JARID2 EDOMIPS2 GEO Homo sapiens GSE48516 4,170
JARID2 UTEIPS6 GEO Homo sapiens GSE48516 12,538
JARID2 AMIPS8 GEO Homo sapiens GSE48516 3,322
JARID2 UTEIPS7 GEO Homo sapiens GSE48516 5,575
JARID2 UTEIPS4 GEO Homo sapiens GSE48516 2,666
JARID2 MRC-5 IPS25 GEO Homo sapiens GSE48516 2,825
JARID2 MRC-5 IPS25_MEG3 GEO Homo sapiens GSE48515 30,199
JARID2 MRC-5 IPS25_CTR GEO Homo sapiens GSE48515 21,804
JARID2 hESC TKO GEO Homo sapiens GSE133412 338
JARID2 hESC GEO Homo sapiens GSE133412 973
JARID2 UTEIPS11 GEO Homo sapiens GSE48516 4,791
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks