KDM1A
Information KDM1A
- Description
This gene encodes a nuclear protein containing a SWIRM domain, a FAD-binding motif, and an amine oxidase domain. This protein is a component of several histone deacetylase complexes, though it silences genes by functioning as a histone demethylase. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2009]
- Full Name
lysine demethylase 1A
Source NCBI
- Species
Homo sapiens [tax_id: 9606]
- Genome
hg38
ReMap Statistics
- Datasets
- 36
- Biotypes
- 15
- Peaks
- 689,204
- Non-redundant peaks
- 283,140
TF Classification
- Super Class
- NA
- Class
- NA
- Familly
- NA
- Sub Familly
- NA
Source TFClass
External IDs
- NCBI Gene
- 23028
- Official Gene Name
- KDM1A
- JASPAR
- Ensembl
- ENSG00000004487
- UniProt
- O60341
- Genevisible
- O60341
- RefSeq
- NM_001009999
- Aliases
- AOF2; BHC110; CPRF; KDM1; KIAA0601; LSD1
Datasets Table for KDM1A
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
|---|---|---|---|---|---|---|---|---|
| KDM1A | 8A | SH-SY5Y | B3_SHCTR | GEO | Homo sapiens | GSE58258 | 949 | |
| KDM1A | SH-SY5Y | B3 | GEO | Homo sapiens | GSE58258 | 44,347 | ||
| KDM1A | SH-SY5Y | B0 | GEO | Homo sapiens | GSE58258 | 17,385 | ||
| KDM1A | SH-SY5Y | B0_SHLSD18A | GEO | Homo sapiens | GSE58258 | 12,219 | ||
| KDM1A | 8A | SH-SY5Y | B3_SHLSD18A | GEO | Homo sapiens | GSE58258 | 101 | |
| KDM1A | 8A | SH-SY5Y | B0_SHLSD18A | GEO | Homo sapiens | GSE58258 | 139 | |
| KDM1A | SKNO-1 | DMSO | GEO | Homo sapiens | GSE71739 | 4,960 | ||
| KDM1A | SKNO-1 | GSK690 | GEO | Homo sapiens | GSE71739 | 27,737 | ||
| KDM1A | SKNO-1 | RN1 | GEO | Homo sapiens | GSE71739 | 26,636 | ||
| KDM1A | SU-DHL-4 | GEO | Homo sapiens | GSE119038 | 11,831 | |||
| KDM1A | SET-2 | insR | GEO | Homo sapiens | GSE121424 | 1,071 | ||
| KDM1A | SET-2 | GSK | GEO | Homo sapiens | GSE121424 | 12,029 | ||
| KDM1A | SET-2 | GSK_insR | GEO | Homo sapiens | GSE121424 | 381 | ||
| KDM1A | SET-2 | GEO | Homo sapiens | GSE121424 | 4,271 | |||
| KDM1A | OCI-Ly1 | si | GEO | Homo sapiens | GSE107920 | 4,878 | ||
| KDM1A | OCI-Ly1 | GEO | Homo sapiens | GSE107920 | 3,395 | |||
| KDM1A | HeLa | GEO | Homo sapiens | GSE45441 | 3,298 | |||
| KDM1A | Kasumi-1 | GSK690 | GEO | Homo sapiens | GSE71739 | 32,913 | ||
| KDM1A | Kasumi-1 | DMSO | GEO | Homo sapiens | GSE71739 | 38,190 | ||
| KDM1A | Kasumi-1 | RN1 | GEO | Homo sapiens | GSE71739 | 39,942 | ||
| KDM1A | NB4 | DMSO | GEO | Homo sapiens | GSE128528 | 62,802 | ||
| KDM1A | K-562 | Wnt | GEO | Homo sapiens | GSE117944 | 48,027 | ||
| KDM1A | K-562 | GEO | Homo sapiens | GSE117944 | 62,014 | |||
| KDM1A | K-562 | ENCODE | Homo sapiens | ENCSR908CMW | 34,772 | |||
| KDM1A | K-562 | ENCODE | Homo sapiens | ENCSR360HRA | 20,964 | |||
| KDM1A | K-562 | ENCODE | Homo sapiens | ENCSR000ATX | 15,387 | |||
| KDM1A | A-549 | ENCODE | Homo sapiens | ENCSR639GWS | 11,163 | |||
| KDM1A | keratinocyte | diff | GEO | Homo sapiens | GSE57702 | 20,907 | ||
| KDM1A | keratinocyte | DMSO | GEO | Homo sapiens | GSE133560 | 933 | ||
| KDM1A | NCI-H526 | DMSO | GEO | Homo sapiens | GSE66297 | 34,983 | ||
| KDM1A | SW480 | GEO | Homo sapiens | GSE139925 | 1,661 | |||
| KDM1A | SW480 | KDM1A-KO | GEO | Homo sapiens | GSE139925 | 114 | ||
| KDM1A | T-47D-MTVL | GEO | Homo sapiens | GSE64467 | 1,735 | |||
| KDM1A | pancreatic-progenitor | GT | GEO | Homo sapiens | GSE104840 | 36,624 | ||
| KDM1A | pancreatic-progenitor | PP1 | GEO | Homo sapiens | GSE104840 | 31,601 | ||
| KDM1A | pancreatic-progenitor | PP2-KDM1A-inh | GEO | Homo sapiens | GSE104840 | 18,845 | ||
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |