KDM3A

Information KDM3A

Description

Histone demethylase that specifically demethylates 'Lys-9' of histone H3, thereby playing a central role in histone code. Preferentially demethylates mono- and dimethylated H3 'Lys-9' residue, with a preference for dimethylated residue, while it has weak or no activity on trimethylated H3 'Lys-9'. Demethylation of Lys residue generates formaldehyde and succinate. Involved in hormone-dependent transcriptional activation, by participating in recruitment to androgen-receptor target genes, resulting in H3 'Lys-9' demethylation and transcriptional activation (By similarity). Involved in spermatogenesis by regulating expression of target genes such as PRM1 and TNP1 which are required for packaging and condensation of sperm chromatin (PubMed:17943087). Involved in obesity resistance through regulation of metabolic genes such as PPARA and UCP1. {ECO:0000250, ECO:0000269|PubMed:17943087, ECO:0000269|PubMed:19194461}.(Source UnitProtKB).

Full Name

lysine (K)-specific demethylase 3A

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
18,703
Non-redundant peaks
17,110

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
104263
Official Gene Name
Kdm3a
JASPAR
MGI
MGI:98847
Ensembl
ENSMUSG00000053470
UniProt
Q6PCM1
Genevisible
Q6PCM1
RefSeq
Aliases
1700105C21Rik; C230043E16Rik; Jmjd1; Jmjd1a; Tsga
All peaks KDM3A
Download BED file
Non redundant peaks KDM3A
Download BED file
SEQUENCES KDM3A
Download FASTA file
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Datasets Table for KDM3A

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
KDM3A iBAT GEO Mus musculus GSE67586 3,842
KDM3A iBAT ISO GEO Mus musculus GSE67586 14,861
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks