MYOD1

Information MYOD1

Description

Acts as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation (PubMed:16901893). Together with MYF5 and MYOG, co-occupies muscle-specific gene promoter core region during myogenesis. Induces fibroblasts to differentiate into myoblasts. Interacts with and is inhibited by the twist protein. This interaction probably involves the basic domains of both proteins (PubMed:21798092, PubMed:3175662). {ECO:0000269|PubMed:16901893, ECO:0000269|PubMed:21798092, ECO:0000269|PubMed:3175662}.(Source UnitProtKB).

Full Name

myogenic differentiation 1

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
34
Biotypes
11
Peaks
469,025
Non-redundant peaks
183,963

TF Classification

Familly
Basic helix-loop-helix factors (bHLH)
Sub Familly
MyoD / ASC-related factors

Source JASPAR

External IDs

NCBI Gene
17927
Official Gene Name
Myod1
JASPAR
MA0499.1
MGI
MGI:97275
Ensembl
ENSMUSG00000009471
UniProt
P10085
Genevisible
P10085
RefSeq
NM_010866
Aliases
AI503393; MYF3; MyoD; Myod-1; bHLHc1

External links
All peaks MYOD1
Download BED file
Non redundant peaks MYOD1
Download BED file
SEQUENCES MYOD1
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for MYOD1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
MYOD1 myocyte ENCODE Mus musculus ENCSR000AIT 9,706
MYOD1 myocyte 48h-differentiating GEO Mus musculus GSE24852 6,983
MYOD1 myocyte ENCODE Mus musculus ENCSR000AIR 18,647
MYOD1 myocyte ENCODE Mus musculus ENCSR000AIH 9,861
MYOD1 P19 WC-mut_Ab1 GEO Mus musculus GSE64626 17,441
MYOD1 P19 WC-mut_Ab2 GEO Mus musculus GSE64626 21,926
MYOD1 MEF GEO Mus musculus GSE75370 35,221
MYOD1 C2C12 undifferentiated GEO Mus musculus GSE63716 2,365
MYOD1 C2C12 ENCODE Mus musculus ENCSR000AIG 14,334
MYOD1 C2C12 GEO Mus musculus GSE80812 913
MYOD1 C2C12 myotube GEO Mus musculus GSE49313 65,501
MYOD1 C2C12 GEO Mus musculus GSE44824 35,696
MYOD1 myoblast GEO Mus musculus GSE134251 11,568
MYOD1 mESC GEO Mus musculus GSE21614 8,527
MYOD1 mESC 24h GEO Mus musculus GSE97712 1,550
MYOD1 myotube GEO Mus musculus GSE21614 11,383
MYOD1 muscle GEO Mus musculus GSE122082 12,033
MYOD1 myocyte 10h-differentiating GEO Mus musculus GSE24852 26,131
MYOD1 preadipocyte GFP-D5 GEO Mus musculus GSE50465 23,158
MYOD1 myoblast pyruvate GEO Mus musculus GSE134251 8,160
MYOD1 myoblast GEO Mus musculus GSE24852 169
MYOD1 fibroblast C3H10T1-2 GEO Mus musculus GSE24852 843
MYOD1 mESC FLAG GEO Mus musculus GSE97712 3,084
MYOD1 P19 GEO Mus musculus GSE34906 29,791
MYOD1 P19 WCS-mut_Ab1 GEO Mus musculus GSE64626 14,379
MYOD1 P19 WCS-mut_Ab2 GEO Mus musculus GSE64626 15,392
MYOD1 C2C12 Klf-KO GEO Mus musculus GSE80812 210
MYOD1 C2C12 myoblast GEO Mus musculus GSE49313 49,794
MYOD1 C2C12 differentiated GEO Mus musculus GSE63716 15,537
MYOD1 myoblast GEO Mus musculus GSE56077 47,022
MYOD1 primary-myoblast DM_GFP GEO Mus musculus GSE127998 15,658
MYOD1 primary-myoblast DM_TW2 GEO Mus musculus GSE127998 7,454
MYOD1 primary-myoblast GM_GFP GEO Mus musculus GSE127998 19,094
MYOD1 primary-myoblast GM_TW2 GEO Mus musculus GSE127998 10,245
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks