NPAS4
Information NPAS4
- Description
Transcription factor expressed in neurons of the brain that regulates the excitatory-inhibitory balance within neural circuits and is required for contextual memory in the hyppocampus (PubMed:18815592, PubMed:22194569, PubMed:23029555, PubMed:24201284, PubMed:24855953). Plays a key role in the structural and functional plasticity of neurons (PubMed:23172225). Acts as an early-response transcription factor in both excitatory and inhibitory neurons, where it induces distinct but overlapping sets of late-response genes in these two types of neurons, allowing the synapses that form on inhibitory and excitatory neurons to be modified by neuronal activity in a manner specific to their function within a circuit, thereby facilitating appropriate circuit responses to sensory experience (PubMed:24201284, PubMed:24855953). In excitatory neurons, activates transcription of BDNF, which in turn controls the number of GABA-releasing synapses that form on excitatory neurons, thereby promoting an increased number of inhibitory synapses on excitatory neurons (PubMed:18815592, PubMed:22194569, PubMed:24201284). In inhibitory neurons, regulates a distinct set of target genes that serve to increase excitatory input onto somatostatin neurons, probably resulting in enhanced feedback inhibition within cortical circuits (PubMed:24855953). The excitatory and inhibitory balance in neurons affects a number of processes, such as short-term and long-term memory, acquisition of experience, fear memory, response to stress and social behavior (PubMed:18815592, PubMed:22194569, PubMed:23029555, PubMed:24201284, PubMed:27238022). Acts as a regulator of dendritic spine development in olfactory bulb granule cells in a sensory-experience-dependent manner by regulating expression of MDM2 (PubMed:25088421). Efficient DNA binding requires dimerization with another bHLH protein, such as ARNT, ARNT2 or BMAL1 (PubMed:14701734, PubMed:15363889, PubMed:19284974). Can activate the CME (CNS midline enhancer) element (PubMed:14701734, PubMed:15363889). {ECO:0000269|PubMed:14701734, ECO:0000269|PubMed:15363889, ECO:0000269|PubMed:18815592, ECO:0000269|PubMed:22194569, ECO:0000269|PubMed:23029555, ECO:0000269|PubMed:23172225, ECO:0000269|PubMed:24201284, ECO:0000269|PubMed:24855953, ECO:0000269|PubMed:25088421, ECO:0000269|PubMed:27238022}.(Source UnitProtKB).
- Full Name
neuronal PAS domain protein 4
Source UniprotKB
- Species
Mus musculus [tax_id: 10090]
- Genome
mm10
ReMap Statistics
- Datasets
- 6
- Biotypes
- 1
- Peaks
- 45,153
- Non-redundant peaks
- 36,812
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 225872
- Official Gene Name
- Npas4
- JASPAR
- MGI
- MGI:2664186
- Ensembl
- ENSMUSG00000045903
- UniProt
- Q8BGD7
- Genevisible
- Q8BGD7
- RefSeq
- NM_153553
- Aliases
- LE-PAS; Npas4; Nxf
Datasets Table for NPAS4
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
NPAS4 | embryonic-cortical-culture | 0kcl_n4shrna | GEO | Mus musculus | GSE121660 | 110 | ||
NPAS4 | embryonic-cortical-culture | 2kcl_n4shrna | GEO | Mus musculus | GSE121660 | 104 | ||
NPAS4 | embryonic-cortical-culture | 2kcl_ctlshrna | GEO | Mus musculus | GSE121660 | 8,681 | ||
NPAS4 | embryonic-cortical-culture | 0kcl | GEO | Mus musculus | GSE121660 | 182 | ||
NPAS4 | embryonic-cortical-culture | 2kcl | GEO | Mus musculus | GSE121660 | 35,550 | ||
NPAS4 | embryonic-cortical-culture | 2kcl_a2shrna | GEO | Mus musculus | GSE121660 | 526 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |