NR1D1

Information NR1D1

Description

This gene encodes a transcription factor that is a member of the nuclear receptor subfamily 1. The encoded protein is a ligand-sensitive transcription factor that negatively regulates the expression of core clock proteins. In particular this protein represses the circadian clock transcription factor aryl hydrocarbon receptor nuclear translocator-like protein 1 (Arntl). This protein may also be involved in regulating genes that function in metabolic, inflammatory and cardiovascular processes. [provided by RefSeq, Feb 2014]

Full Name

nuclear receptor subfamily 1, group D, member 1

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
23
Biotypes
7
Peaks
717,097
Non-redundant peaks
223,419

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
217166
Official Gene Name
Nr1d1
JASPAR
MGI
MGI:2444210
Ensembl
ENSMUSG00000020889
UniProt
Q3UV55
Genevisible
Q3UV55
RefSeq
NM_145434
Aliases
A530070C09Rik; REV-ERBalpha; rev-erbA(alpha)

External links
All peaks NR1D1
Download BED file
Non redundant peaks NR1D1
Download BED file
SEQUENCES NR1D1
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for NR1D1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
NR1D1 liver ZT10 GEO Mus musculus GSE26345 31,128
NR1D1 liver DBD-mut GEO Mus musculus GSE67962 60,973
NR1D1 liver 5AM GEO Mus musculus GSE104129 73,659
NR1D1 liver GEO Mus musculus GSE34019 24,669
NR1D1 liver ZT22 GEO Mus musculus GSE36375 60,448
NR1D1 liver 5PM_NR1D1-KO GEO Mus musculus GSE104129 73,148
NR1D1 liver ZT22 GEO Mus musculus GSE26345 102
NR1D1 liver SRC-2-KO GEO Mus musculus GSE67852 20,146
NR1D1 liver 129 GEO Mus musculus GSE67962 70,787
NR1D1 liver Hnf6-KO GEO Mus musculus GSE83790 69,359
NR1D1 eWAT GEO Mus musculus GSE79165 4,901
NR1D1 brown-adipose-tissue Thra-KO GEO Mus musculus GSE79167 59,642
NR1D1 brown-adipose-tissue 4C GEO Mus musculus GSE128960 14,589
NR1D1 brown-adipose-tissue 29C GEO Mus musculus GSE128960 1,471
NR1D1 macrophage GEO Mus musculus GSE45914 14,313
NR1D1 Th17 GEO Mus musculus GSE72271 5,416
NR1D1 heart GEO Mus musculus GSE73741 2,111
NR1D1 heart Klf15-KO GEO Mus musculus GSE73741 2,066
NR1D1 brown-adipose-tissue 5pm_4C GEO Mus musculus GSE79167 46,086
NR1D1 eWAT GEO Mus musculus GSE67962 6,032
NR1D1 liver GEO Mus musculus GSE67852 13,124
NR1D1 liver GEO Mus musculus GSE67962 50,840
NR1D1 brain GEO Mus musculus GSE67962 12,087
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks