PAF1

Information PAF1

Description

Component of the PAF1 complex (PAF1C) which has multiple functions during transcription by RNA polymerase II and is implicated in regulation of development and maintenance of embryonic stem cell pluripotency. PAF1C associates with RNA polymerase II through interaction with POLR2A CTD non-phosphorylated and 'Ser-2'- and 'Ser-5'-phosphorylated forms and is involved in transcriptional elongation, acting both independently and synergistically with TCEA1 and in cooperation with the DSIF complex and HTATSF1. PAF1C is required for transcription of Hox and Wnt target genes. PAF1C is involved in hematopoiesis and stimulates transcriptional activity of KMT2A/MLL1. PAF1C is involved in histone modifications such as ubiquitination of histone H2B and methylation on histone H3 'Lys-4' (H3K4me3). PAF1C recruits the RNF20/40 E3 ubiquitin-protein ligase complex and the E2 enzyme UBE2A or UBE2B to chromatin which mediate monoubiquitination of 'Lys-120' of histone H2B (H2BK120ub1); UB2A/B-mediated H2B ubiquitination is proposed to be coupled to transcription. PAF1C is involved in mRNA 3' end formation probably through association with cleavage and poly(A) factors. Connects PAF1C with the RNF20/40 E3 ubiquitin-protein ligase complex. Involved in polyadenylation of mRNA precursors (By similarity). {ECO:0000250, ECO:0000269|PubMed:19345177}.(Source UnitProtKB).

Full Name

Paf1, RNA polymerase II complex component

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
62,427
Non-redundant peaks
56,912

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
54624
Official Gene Name
Paf1
JASPAR
MGI
MGI:1923988
Ensembl
ENSMUSG00000003437
UniProt
Q8K2T8
Genevisible
Q8K2T8
RefSeq
Aliases
5730511K23Rik
All peaks PAF1
Download BED file
Non redundant peaks PAF1
Download BED file
SEQUENCES PAF1
Download FASTA file
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Datasets Table for PAF1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
PAF1 C2C12 myotube GEO Mus musculus GSE72574 34,082
PAF1 C2C12 myoblast GEO Mus musculus GSE72574 28,345
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks