PAX6

Information PAX6

Description

This gene encodes a homeobox-containing protein that functions as a regulator of transcription. It plays a key role in the development of neural tissues, particularly the eye. Activity of this protein is also required for expression of glucagon in the pancreas. This gene is regulated by multiple enhancers located up to tens or hundreds of kilobases upstream and downstream of the transcription start sites. Mutations in this gene or deletion of these regulatory elements results in severe defects in eye development. Alternative splicing and the use of alternative promoters results in multiple transcript variants, some of which encode proteins that lack the N-terminal paired domain. [provided by RefSeq, Jul 2015]

Full Name

paired box 6

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
5
Biotypes
4
Peaks
76,711
Non-redundant peaks
54,339

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
18508
Official Gene Name
Pax6
JASPAR
MGI
MGI:97490
Ensembl
ENSMUSG00000027168
UniProt
P63015
Genevisible
P63015
RefSeq
NM_013627
Aliases
1500038E17Rik; AEY11; Dey; Dickie's small eye; Gsfaey11; Pax-6; Sey
All peaks PAX6
Download BED file
Non redundant peaks PAX6
Download BED file
SEQUENCES PAX6
Download FASTA file
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Datasets Table for PAX6

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
PAX6 lens GEO Mus musculus GSE66961 5,502
PAX6 alphaTC1 paupar GEO Mus musculus GSE132069 22,932
PAX6 alphaTC1 control GEO Mus musculus GSE132069 29,712
PAX6 MIN6 GEO Mus musculus GSE87530 5,550
PAX6 forebrain GEO Mus musculus GSE66961 13,015
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks