PHF5A

Information PHF5A

Description

This gene encodes a subunit of the splicing factor 3b protein complex. Splicing factor 3b, together with splicing factor 3a and a 12S RNA unit, forms the U2 small nuclear ribonucleoproteins complex (U2 snRNP). The splicing factor 3b/3a complex binds pre-mRNA upstream of the intron's branch site in a sequence-independent manner and may anchor the U2 snRNP to the pre-mRNA. The protein encoded by this gene contains a PHD-finger-like domain that is flanked by highly basic N- and C-termini. This protein belongs to the PHD-finger superfamily and may act as a chromatin-associated protein. This gene has several pseudogenes on different chromosomes. [provided by RefSeq, Jul 2008]

Full Name

PHD finger protein 5A

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
55,882
Non-redundant peaks
55,882

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

NCBI Gene
84844
Official Gene Name
PHF5A
JASPAR
Ensembl
ENSG00000100410
UniProt
Q7RTV0
Genevisible
Q7RTV0
RefSeq
NM_032758
Aliases
INI; MGC1346; Rds3; SAP14b; SF3B7; SF3b14b; bK223H9.2
All peaks PHF5A
Download BED file
Non redundant peaks PHF5A
Download BED file
SEQUENCES PHF5A
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for PHF5A

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
PHF5A Hep-G2 ENCODE Homo sapiens ENCSR191TLD 55,882
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks