PHF8
Information PHF8
- Description
Histone lysine demethylase with selectivity for the di- and monomethyl states that plays a key role cell cycle progression, rDNA transcription and brain development. Demethylates mono- and dimethylated histone H3 'Lys-9' residue (H3K9Me1 and H3K9Me2), dimethylated H3 'Lys-27' (H3K27Me2) and monomethylated histone H4 'Lys-20' residue (H4K20Me1). Acts as a transcription activator as H3K9Me1, H3K9Me2, H3K27Me2 and H4K20Me1 are epigenetic repressive marks. Involved in cell cycle progression by being required to control G1-S transition. Acts as a coactivator of rDNA transcription, by activating polymerase I (pol I) mediated transcription of rRNA genes. Required for brain development, probably by regulating expression of neuron-specific genes. Has activity toward H4K20Me1 only when nucleosome is used as a substrate and when not histone octamer is used as substrate. May also have weak activity toward dimethylated H3 'Lys-36' (H3K36Me2), however, the relevance of this result remains unsure in vivo. Specifically binds trimethylated 'Lys-4' of histone H3 (H3K4me3), affecting histone demethylase specificity: has weak activity toward H3K9Me2 in absence of H3K4me3, while it has high activity toward H3K9me2 when binding H3K4me3. {ECO:0000250|UniProtKB:Q9UPP1}.(Source UnitProtKB).
- Full Name
PHD finger protein 8
Source UniprotKB
- Species
Mus musculus [tax_id: 10090]
- Genome
mm10
ReMap Statistics
- Datasets
- 8
- Biotypes
- 1
- Peaks
- 316,958
- Non-redundant peaks
- 75,398
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 320595
- Official Gene Name
- Phf8
- JASPAR
- MGI
- MGI:2444341
- Ensembl
- ENSMUSG00000041229
- UniProt
- Q80TJ7
- Genevisible
- Q80TJ7
- RefSeq
- Aliases
- 9830141C09Rik
Datasets Table for PHF8
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
PHF8 | prostate | high-fat-diet | GEO | Mus musculus | GSE90910 | 30,981 | ||
PHF8 | prostate | hi-MYC | GEO | Mus musculus | GSE90910 | 45,626 | ||
PHF8 | prostate | HFD | GEO | Mus musculus | GSE90910 | 30,981 | ||
PHF8 | prostate | HFD_Hi-MYC | GEO | Mus musculus | GSE90910 | 46,274 | ||
PHF8 | prostate | GEO | Mus musculus | GSE90910 | 35,598 | |||
PHF8 | prostate | control-diet | GEO | Mus musculus | GSE90910 | 35,598 | ||
PHF8 | prostate | MYC_high-fat-diet | GEO | Mus musculus | GSE90910 | 46,274 | ||
PHF8 | prostate | MYC_control-diet | GEO | Mus musculus | GSE90910 | 45,626 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |