PIF5

Information PIF5

Description

Encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family. Involved in shade avoidance. Functions as negative regulator of PhyB. Protein levels are modulated by phytochrome B.

Full Name

phytochrome interacting factor 3-like 6

Source NCBI

Species

Arabidopsis thaliana [tax_id: 3702]

Genome

TAIR10

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
9,361
Non-redundant peaks
7,765

TF Classification

Familly
bHLH
Sub Familly
PHYTOCHROME-INTERACTING FACTOR 5

Source AtTFDB

External IDs

NCBI Gene
825075
Official Gene Name
PIF5
JASPAR
MA0562
Ensembl
AT3G59060
UniProt
Q84LH8
Genevisible
Q84LH8
RefSeq
NM_180690.2
Aliases

External links
All peaks PIF5
Download BED file
Non redundant peaks PIF5
Download BED file
SEQUENCES PIF5
Download FASTA file
DOWNLOAD All ReMap
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Datasets Table for PIF5

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
PIF5 Col-0 Col-0_seedling 14d GEO Arabidopsis thaliana GSE35059 2,390
PIF5 Col-0 Col-0_seedling 5d GEO Arabidopsis thaliana GSE68193 6,971
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks