PRDM1

Information PRDM1

Description

Transcription factor that mediates a transcriptional program in various innate and adaptive immune tissue-resident lymphocyte T cell types such as tissue-resident memory T (Trm), natural killer (trNK) and natural killer T (NKT) cells and negatively regulates gene expression of proteins that promote the egress of tissue-resident T-cell populations from non-lymphoid organs (PubMed:27102484). Plays a role in the development, retention and long-term establishment of adaptive and innate tissue-resident lymphocyte T cell types in non-lymphoid organs, such as the skin and gut, but also in other nonbarrier tissues like liver and kidney, and therefore may provide immediate immunological protection against reactivating infections or viral reinfection (PubMed:27102484). Binds specifically to the PRDI element in the promoter of the beta-interferon gene (By similarity). Drives the maturation of B-lymphocytes into Ig secreting cells (By similarity). Associates with the transcriptional repressor ZNF683 to chromatin at gene promoter regions (PubMed:27102484). {ECO:0000250|UniProtKB:O75626, ECO:0000269|PubMed:27102484}.(Source UnitProtKB).

Full Name

PR domain containing 1, with ZNF domain

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
11
Biotypes
8
Peaks
235,413
Non-redundant peaks
145,474

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
12142
Official Gene Name
Prdm1
JASPAR
MGI
MGI:99655
Ensembl
ENSMUSG00000038151
UniProt
Q60636
Genevisible
Q60636
RefSeq
NM_007548
Aliases
Blimp-1; Blimp1; PRDI-BF1; ZNFPR1A1; b2b1765Clo
All peaks PRDM1
Download BED file
Non redundant peaks PRDM1
Download BED file
SEQUENCES PRDM1
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for PRDM1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
PRDM1 intestine GEO Mus musculus GSE66069 2,475
PRDM1 PGCLC d2 GEO Mus musculus GSE91038 38,957
PRDM1 PGCLC d6 GEO Mus musculus GSE91038 56,470
PRDM1 photoreceptor-precursor GEO Mus musculus GSE91038 23,309
PRDM1 plasmablast GEO Mus musculus GSE71698 17,923
PRDM1 plasmablast GEO Mus musculus GSE91038 38,400
PRDM1 embryonic-intestinal-epithelium GEO Mus musculus GSE91038 16,261
PRDM1 trophoblast-stem-cell GEO Mus musculus GSE74408 1,246
PRDM1 PGC E125_male GEO Mus musculus GSE91038 20,222
PRDM1 PGC E125_demale GEO Mus musculus GSE91038 17,566
PRDM1 CD8 GEO Mus musculus GSE79339 2,584
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks