Pdp1

Information Pdp1

Description

The gene PAR-domain protein 1 is referred to in FlyBase by the symbol DmelPdp1 (CG17888, FBgn0016694). It is a protein_coding_gene from Dmel. It has 13 annotated transcripts and 13 polypeptides (11 unique). Gene sequence location is 3L:7811458..7867369. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific; DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription factor activity; sequence-specific DNA binding. It is involved in the biological process described with: regulation of transcription by RNA polymerase II; positive regulation of transcription, DNA-templated; regulation of lipid metabolic process; circadian rhythm. 42 alleles are reported. The phenotypes of these alleles manifest in: myofibril; wing; sarcomere; M band. The phenotypic classes of alleles include: some die during larval stage; visible; lethal - all die before end of prepupal stage; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 12-24 hour embryonic stages, during early larval stages, in adult male stages.

Full Name

PAR-domain protein 1

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
2
Biotypes
1
Peaks
58,628
Non-redundant peaks
44,833

TF Classification

Familly
Basic leucine zipper factors (bZIP)
Sub Familly

Source JASPAR

External IDs

NCBI Gene
45588
Official Gene Name
Pdp1
JASPAR
MA1702.1
Ensembl
FBgn0016694
UniProt
Genevisible
RefSeq
NM_168239
Aliases
Pdp1
All peaks Pdp1
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Non redundant peaks Pdp1
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SEQUENCES Pdp1
Download FASTA file
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Datasets Table for Pdp1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Pdp1 adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR005MLL 22,559
Pdp1 adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR339IEZ 36,069
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks