RELA
Information RELA
- Description
NF-kappa-B is a pleiotropic transcription factor present in almost all cell types and is the endpoint of a series of signal transduction events that are initiated by a vast array of stimuli related to many biological processes such as inflammation, immunity, differentiation, cell growth, tumorigenesis and apoptosis. NF-kappa-B is a homo- or heterodimeric complex formed by the Rel-like domain-containing proteins RELA/p65, RELB, NFKB1/p105, NFKB1/p50, REL and NFKB2/p52. The heterodimeric RELA-NFKB1 complex appears to be most abundant one. The dimers bind at kappa-B sites in the DNA of their target genes and the individual dimers have distinct preferences for different kappa-B sites that they can bind with distinguishable affinity and specificity. Different dimer combinations act as transcriptional activators or repressors, respectively. The NF-kappa-B heterodimeric RELA-NFKB1 and RELA-REL complexes, for instance, function as transcriptional activators. NF-kappa-B is controlled by various mechanisms of post-translational modification and subcellular compartmentalization as well as by interactions with other cofactors or corepressors. NF-kappa-B complexes are held in the cytoplasm in an inactive state complexed with members of the NF-kappa-B inhibitor (I-kappa-B) family. In a conventional activation pathway, I-kappa-B is phosphorylated by I-kappa-B kinases (IKKs) in response to different activators, subsequently degraded thus liberating the active NF-kappa-B complex which translocates to the nucleus. The inhibitory effect of I-kappa-B on NF-kappa-B through retention in the cytoplasm is exerted primarily through the interaction with RELA. RELA shows a weak DNA-binding site which could contribute directly to DNA binding in the NF-kappa-B complex. Beside its activity as a direct transcriptional activator, it is also able to modulate promoters accessibility to transcription factors and thereby indirectly regulate gene expression (PubMed:29813070). Associates with chromatin at the NF-kappa-B promoter region via association with DDX1. Essential for cytokine gene expression in T-cells (By similarity). The NF-kappa-B homodimeric RELA-RELA complex appears to be involved in invasin-mediated activation of IL-8 expression (By similarity). {ECO:0000250|UniProtKB:Q04206, ECO:0000269|PubMed:21131967, ECO:0000269|PubMed:22244329, ECO:0000269|PubMed:29813070}.(Source UnitProtKB).
- Full Name
v-rel reticuloendotheliosis viral oncogene homolog A (avian)
Source UniprotKB
- Species
Mus musculus [tax_id: 10090]
- Genome
mm10
ReMap Statistics
- Datasets
- 102
- Biotypes
- 13
- Peaks
- 2,638,678
- Non-redundant peaks
- 400,599
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 19697
- Official Gene Name
- Rela
- JASPAR
- MGI
- MGI:103290
- Ensembl
- ENSMUSG00000024927
- UniProt
- Q04207
- Genevisible
- Q04207
- RefSeq
- NM_009045
- Aliases
- p65; p65 NF kappaB; p65 NF-kappa B; p65 NFkB
Datasets Table for RELA
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
RELA | spleen | GEO | Mus musculus | GSE98263 | 673 | |||
RELA | T-cell | stim_Treg | GEO | Mus musculus | GSE99319 | 27,625 | ||
RELA | T-cell | stim_Tconv | GEO | Mus musculus | GSE99319 | 22,828 | ||
RELA | Th1 | GEO | Mus musculus | GSE62482 | 28,384 | |||
RELA | Treg | GEO | Mus musculus | GSE99319 | 6,410 | |||
RELA | MEF | 0-5h_Rela-mut | GEO | Mus musculus | GSE132863 | 38,071 | ||
RELA | MEF | 0h_Rela-mut | GEO | Mus musculus | GSE132863 | 4,513 | ||
RELA | MEF | 0h | GEO | Mus musculus | GSE132792 | 994 | ||
RELA | primary-hepatocyte | IL-1 | GEO | Mus musculus | GSE96767 | 2,412 | ||
RELA | BMDC | 1h | GEO | Mus musculus | GSE36099 | 24,983 | ||
RELA | macrophage | B6_Kdo2-LipidA | GEO | Mus musculus | GSE46494 | 77,743 | ||
RELA | macrophage | g2 | GEO | Mus musculus | GSE48759 | 519 | ||
RELA | macrophage | KLA-6h | GEO | Mus musculus | GSE48759 | 15,377 | ||
RELA | macrophage | GEO | Mus musculus | GSE50944 | 8,198 | |||
RELA | macrophage | Flavo-7h | GEO | Mus musculus | GSE48759 | 6,129 | ||
RELA | macrophage | GEO | Mus musculus | GSE48759 | 1,669 | |||
RELA | macrophage | NCor-KO_KLA-1h | GEO | Mus musculus | GSE50944 | 39,208 | ||
RELA | macrophage | KLA-1h | GEO | Mus musculus | GSE50944 | 47,519 | ||
RELA | EL4 | RA | GEO | Mus musculus | GSE62482 | 8,926 | ||
RELA | aorta | VSMC_IFNa-LPS | GEO | Mus musculus | GSE120806 | 55,414 | ||
RELA | aorta | VSMC_IFNg | GEO | Mus musculus | GSE120806 | 12,185 | ||
RELA | aorta | VSMC_IFNa | GEO | Mus musculus | GSE120806 | 9,176 | ||
RELA | BMM | GEO | Mus musculus | GSE54414 | 37,944 | |||
RELA | BMDM | 15min | GEO | Mus musculus | GSE99895 | 30,300 | ||
RELA | BMDM | NOD | GEO | Mus musculus | GSE109965 | 65,977 | ||
RELA | BMDM | 2h | GEO | Mus musculus | GSE99895 | 36,338 | ||
RELA | BMDM | KLA4h_BMAL-KO | GEO | Mus musculus | GSE95712 | 36,352 | ||
RELA | BMDM | KLA_PWK | GEO | Mus musculus | GSE109965 | 62,229 | ||
RELA | BMDM | lipidA-15min | GEO | Mus musculus | GSE67343 | 12,503 | ||
RELA | BMDM | KLA4h | GEO | Mus musculus | GSE95712 | 40,880 | ||
RELA | BMDM | veh-6h | GEO | Mus musculus | GSE72964 | 35,029 | ||
RELA | BMDM | lipidA-30min | GEO | Mus musculus | GSE67343 | 11,506 | ||
RELA | BMDM | SREBF1-KO_KLA-6h | GEO | Mus musculus | GSE79423 | 70,615 | ||
RELA | BMDM | KLA0h | GEO | Mus musculus | GSE95712 | 499 | ||
RELA | BMDM | LPS-0h_Littermate-ctrl | GEO | Mus musculus | GSE93599 | 158 | ||
RELA | BMDM | KLA12h_BMAL-KO | GEO | Mus musculus | GSE95712 | 12,491 | ||
RELA | BMDM | KLA12h | GEO | Mus musculus | GSE95712 | 12,737 | ||
RELA | BMDM | TGFb-6h | GEO | Mus musculus | GSE72964 | 4,113 | ||
RELA | BMDM | IL4 | GEO | Mus musculus | GSE106701 | 23,319 | ||
RELA | BMDM | KLA8h_BMAL-KO | GEO | Mus musculus | GSE95712 | 204,019 | ||
RELA | BMDM | LPS-8h | GEO | Mus musculus | GSE93599 | 3,802 | ||
RELA | BMDM | SPRET | GEO | Mus musculus | GSE109965 | 10,475 | ||
RELA | BMDM | 30min_Irf3-KO | GEO | Mus musculus | GSE99895 | 1,133 | ||
RELA | BMDM | lipidA-1h | GEO | Mus musculus | GSE67343 | 17,495 | ||
RELA | BMDM | KLA8h | GEO | Mus musculus | GSE95712 | 53,616 | ||
RELA | BMDM | LPS-8h_Dex3h-late | GEO | Mus musculus | GSE93736 | 265 | ||
RELA | BMDM | KLA | GEO | Mus musculus | GSE109965 | 58,164 | ||
RELA | BMDM | GEO | Mus musculus | GSE72964 | 6,671 | |||
RELA | BMDM | LPS | GEO | Mus musculus | GSE109131 | 3,561 | ||
RELA | BMDM | lipidA-2h | GEO | Mus musculus | GSE67343 | 5,919 | ||
RELA | BMDM | LPS-3h | GEO | Mus musculus | GSE93736 | 8,801 | ||
RELA | BMDM | homog-6h | GEO | Mus musculus | GSE72964 | 33,797 | ||
RELA | BMDM | LPS-DEX | GEO | Mus musculus | GSE109131 | 3,710 | ||
RELA | BMDM | 1h | GEO | Mus musculus | GSE99895 | 52,307 | ||
RELA | BMDM | 2h_Irf3-KO | GEO | Mus musculus | GSE99895 | 33,017 | ||
RELA | BMDM | 1h_Irf3-KO | GEO | Mus musculus | GSE99895 | 44,238 | ||
RELA | BMDM | KLA48h_BMAL-KO | GEO | Mus musculus | GSE95712 | 2,212 | ||
RELA | BMDM | LPS-3h | GEO | Mus musculus | GSE93599 | 8,800 | ||
RELA | BMDM | GEO | Mus musculus | GSE106701 | 20,201 | |||
RELA | BMDM | KLA-24h | GEO | Mus musculus | GSE79423 | 68,665 | ||
RELA | BMDM | KLA24h_BMAL-KO | GEO | Mus musculus | GSE95712 | 7,081 | ||
RELA | BMDM | 30min | GEO | Mus musculus | GSE99895 | 37,492 | ||
RELA | BMDM | 15min_Irf3-KO | GEO | Mus musculus | GSE99895 | 25,039 | ||
RELA | BMDM | LPS | GEO | Mus musculus | GSE16723 | 28,796 | ||
RELA | BMDM | GEO | Mus musculus | GSE16723 | 988 | |||
RELA | BMM | LPS | GEO | Mus musculus | GSE54414 | 7,139 | ||
RELA | Th1 | TBX21-KO | GEO | Mus musculus | GSE62482 | 50,607 | ||
RELA | T-cell | Tconv | GEO | Mus musculus | GSE99319 | 5,115 | ||
RELA | aorta | VSMC_IFNg-LPS | GEO | Mus musculus | GSE120806 | 58,891 | ||
RELA | aorta | VSMC | GEO | Mus musculus | GSE120806 | 6,045 | ||
RELA | aorta | VSMC_LPS | GEO | Mus musculus | GSE120806 | 61,032 | ||
RELA | BMDM | KLA-6h | GEO | Mus musculus | GSE72964 | 45,074 | ||
RELA | BMDM | LPS-3h_Littermate-ctrl | GEO | Mus musculus | GSE93599 | 1,841 | ||
RELA | BMDM | KLA48h | GEO | Mus musculus | GSE95712 | 1,426 | ||
RELA | BMDM | SREBF1-KO_KLA-24h | GEO | Mus musculus | GSE79423 | 75,767 | ||
RELA | BMDM | LPS | GEO | Mus musculus | GSE106701 | 40,118 | ||
RELA | BMDM | GEO | Mus musculus | GSE79423 | 47,003 | |||
RELA | BMDM | LPS-8h_Littermate-ctrl | GEO | Mus musculus | GSE93599 | 1,357 | ||
RELA | BMDM | LPS-8h | GEO | Mus musculus | GSE93736 | 3,801 | ||
RELA | BMDM | B6 | GEO | Mus musculus | GSE109965 | 37,308 | ||
RELA | BMDM | GEO | Mus musculus | GSE109965 | 62,258 | |||
RELA | BMDM | GEO | Mus musculus | GSE109131 | 1,143 | |||
RELA | BMDM | KLA_B6 | GEO | Mus musculus | GSE109965 | 62,851 | ||
RELA | BMDM | PWK | GEO | Mus musculus | GSE109965 | 60,260 | ||
RELA | BMDM | GEO | Mus musculus | GSE67343 | 254 | |||
RELA | BMDM | Dex_LPS | GEO | Mus musculus | GSE31796 | 17,981 | ||
RELA | BMDM | KLA0h_BMAL-KO | GEO | Mus musculus | GSE95712 | 8,287 | ||
RELA | BMDM | KLA24h | GEO | Mus musculus | GSE95712 | 11,817 | ||
RELA | BMDM | IL4-LPS | GEO | Mus musculus | GSE106701 | 54,934 | ||
RELA | BMDM | SREBF1-KO | GEO | Mus musculus | GSE79423 | 55,230 | ||
RELA | macrophage | NCor-KO | GEO | Mus musculus | GSE50944 | 8,253 | ||
RELA | macrophage | KLA-1h | GEO | Mus musculus | GSE48759 | 30,305 | ||
RELA | macrophage | Kdo2-LipidA | GEO | Mus musculus | GSE46494 | 57,656 | ||
RELA | macrophage | DMSO-7h | GEO | Mus musculus | GSE48759 | 7,701 | ||
RELA | macrophage | KLA-1h_g2 | GEO | Mus musculus | GSE48759 | 44,582 | ||
RELA | MEF | 0-5h | GEO | Mus musculus | GSE132863 | 56,054 | ||
RELA | liver | LPS | GEO | Mus musculus | GSE117488 | 14,629 | ||
RELA | liver | saline | GEO | Mus musculus | GSE117488 | 3,672 | ||
RELA | liver | SFD | GEO | Mus musculus | GSE117488 | 29,011 | ||
RELA | liver | regular-chow | GEO | Mus musculus | GSE117488 | 11,449 | ||
RELA | BMDC | 30min | GEO | Mus musculus | GSE36099 | 9,188 | ||
RELA | BMDC | 2h | GEO | Mus musculus | GSE36099 | 36,219 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |