RFX1

Information RFX1

Description

This gene encodes a member of the regulatory factor X (RFX) family of transcription factors, which are characterized by a winged-helix DNA-binding domain. The encoded transcription factor contains an N-terminal activation domain and a C-terminal repression domain, and may activate or repress target gene expression depending on cellular context. This transcription factor has been shown to regulate a wide variety of genes involved in immunity and cancer, including the MHC class II genes and genes that may be involved in cancer progression. This gene exhibits altered expression in glioblastoma and the autoimmune disease systemic lupus erythematosis (SLE). [provided by RefSeq, Jul 2016]

Full Name

regulatory factor X1

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
5
Biotypes
3
Peaks
90,306
Non-redundant peaks
45,473

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

NCBI Gene
5989
Official Gene Name
RFX1
JASPAR
Ensembl
ENSG00000132005
UniProt
P22670
Genevisible
P22670
RefSeq
NM_002918
Aliases
EF-C; EFC; RFX
All peaks RFX1
Download BED file
Non redundant peaks RFX1
Download BED file
SEQUENCES RFX1
Download FASTA file
DOWNLOAD All ReMap
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Datasets Table for RFX1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
RFX1 MCF-7 ENCODE Homo sapiens ENCSR066TET 28,811
RFX1 MCF-7 ENCODE Homo sapiens ENCSR788XNX 17,766
RFX1 K-562 ENCODE Homo sapiens ENCSR041AXL 17,896
RFX1 K-562 ENCODE Homo sapiens ENCSR968GIB 22,310
RFX1 Hep-G2 ENCODE Homo sapiens ENCSR928API 3,523
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks