RUNX3

Information RUNX3

Description

Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'-TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. The heterodimers bind to the core site of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers, LCK, IL3 and GM-CSF promoters (Probable). May be involved in the control of cellular proliferation and/or differentiation. In association with ZFHX3, upregulates CDKN1A promoter activity following TGF-beta stimulation (By similarity). CBF complexes repress ZBTB7B transcription factor during cytotoxic (CD8+) T cell development. They bind to RUNX-binding sequence within the ZBTB7B locus acting as transcriptional silencer and allowing for cytotoxic T cell differentiation (PubMed:18258917). CBF complexes binding to the transcriptional silencer is essential for recruitment of nuclear protein complexes that catalyze epigenetic modifications to establish epigenetic ZBTB7B silencing (PubMed:23481257). {ECO:0000250|UniProtKB:Q13761, ECO:0000269|PubMed:18258917, ECO:0000269|PubMed:23481257, ECO:0000305}.(Source UnitProtKB).

Full Name

runt related transcription factor 3

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
12
Biotypes
6
Peaks
205,292
Non-redundant peaks
110,715

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
12399
Official Gene Name
Runx3
JASPAR
MGI
MGI:102672
Ensembl
ENSMUSG00000070691
UniProt
Q64131
Genevisible
Q64131
RefSeq
NM_019732
Aliases
AML2; Cbfa3; Pebp2a3; Rx3
All peaks RUNX3
Download BED file
Non redundant peaks RUNX3
Download BED file
SEQUENCES RUNX3
Download FASTA file
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Datasets Table for RUNX3

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
RUNX3 spleen NIS GEO Mus musculus GSE50126 301
RUNX3 NK-cell NIS GEO Mus musculus GSE50127 108
RUNX3 NK-cell GEO Mus musculus GSE50129 31,437
RUNX3 NK-cell GEO Mus musculus GSE50127 18,552
RUNX3 NK-cell NIS GEO Mus musculus GSE50129 34,497
RUNX3 dendritic-cell GEO Mus musculus GSE48588 16,615
RUNX3 pro-T-cell GEO Mus musculus GSE131082 44,917
RUNX3 lung GEO Mus musculus GSE111871 38,699
RUNX3 CD8-pos GEO Mus musculus GSE50130 14,991
RUNX3 CD8-pos GEO Mus musculus GSE50128 9,422
RUNX3 spleen GEO Mus musculus GSE50126 31,737
RUNX3 CD8-pos NIS GEO Mus musculus GSE50130 135
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks