SIX2
Information SIX2
- Description
Transcription factor that plays an important role in the development of several organs, including kidney, skull and stomach. During kidney development, maintains cap mesenchyme multipotent nephron progenitor cells in an undifferentiated state by opposing the inductive signals emanating from the ureteric bud and cooperates with WNT9B to promote renewing progenitor cells proliferation. Acts through its interaction with TCF7L2 and OSR1 in a canonical Wnt signaling independent manner preventing transcription of differentiation genes in cap mesenchyme such as WNT4. Also acts independently of OSR1 to activate expression of many cap mesenchyme genes, including itself, GDNF and OSR1. During craniofacial development plays a role in growth and elongation of the cranial base through regulation of chondrocyte differentiation (PubMed:20515681). During stomach organogenesis, controls pyloric sphincter formation and mucosal growth through regulation of a gene network including NKX2-5, BMPR1B, BMP4, SOX9 and GREM1 (PubMed:19660448). During branchial arch development, acts to mediate HOXA2 control over the insulin-like growth factor pathway (PubMed:18321982). Also may be involved in limb tendon and ligament development (PubMed:7720577). Plays a role in cell proliferation and migration (By similarity). {ECO:0000250|UniProtKB:Q9NPC8, ECO:0000269|PubMed:17036046, ECO:0000269|PubMed:18321982, ECO:0000269|PubMed:18682239, ECO:0000269|PubMed:19660448, ECO:0000269|PubMed:20515681, ECO:0000269|PubMed:21350016, ECO:0000269|PubMed:22902740, ECO:0000269|PubMed:24598167, ECO:0000269|PubMed:7720577}.(Source UnitProtKB).
- Full Name
sine oculis-related homeobox 2
Source UniprotKB
- Species
Mus musculus [tax_id: 10090]
- Genome
mm10
ReMap Statistics
- Datasets
- 5
- Biotypes
- 3
- Peaks
- 200,842
- Non-redundant peaks
- 104,517
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 20472
- Official Gene Name
- Six2
- JASPAR
- MGI
- MGI:102778
- Ensembl
- ENSMUSG00000024134
- UniProt
- Q62232
- Genevisible
- Q62232
- RefSeq
- NM_011380
- Aliases
Datasets Table for SIX2
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
SIX2 | embryonic-kidney | GEO | Mus musculus | GSE73865 | 78,811 | |||
SIX2 | embryonic-kidney | hu | GEO | Mus musculus | GSE73865 | 49,578 | ||
SIX2 | kidney | E16-5_B6 | GEO | Mus musculus | GSE90016 | 12,044 | ||
SIX2 | nephron-progenitor | GEO | Mus musculus | GSE39837 | 45,554 | |||
SIX2 | kidney | E16-5_SJL | GEO | Mus musculus | GSE90016 | 14,855 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |