SMARCA5
Information SMARCA5
- Description
Helicase that possesses intrinsic ATP-dependent nucleosome-remodeling activity. Complexes containing SMARCA5 are capable of forming ordered nucleosome arrays on chromatin; this may require intact histone H4 tails. Also required for replication of pericentric heterochromatin in S-phase specifically in conjunction with BAZ1A. Probably plays a role in repression of polI dependent transcription of the rDNA locus, through the recruitment of the SIN3/HDAC1 corepressor complex to the rDNA promoter. Essential component of the WICH complex, a chromatin remodeling complex that mobilizes nucleosomes and reconfigures irregular chromatin to a regular nucleosomal array structure. The WICH complex regulates the transcription of various genes, has a role in RNA polymerase I and RNA polymerase III transcription, mediates the histone H2AX phosphorylation at 'Tyr-142', and is involved in the maintenance of chromatin structures during DNA replication processes. Essential component of the NoRC (nucleolar remodeling complex) complex, a complex that mediates silencing of a fraction of rDNA by recruiting histone-modifying enzymes and DNA methyltransferases, leading to heterochromatin formation and transcriptional silencing. {ECO:0000269|PubMed:11532953, ECO:0000269|PubMed:11980720, ECO:0000269|PubMed:12198165, ECO:0000269|PubMed:12368916, ECO:0000269|PubMed:14617767, ECO:0000269|PubMed:19092802}.(Source UnitProtKB).
- Full Name
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
Source UniprotKB
- Species
Mus musculus [tax_id: 10090]
- Genome
mm10
ReMap Statistics
- Datasets
- 3
- Biotypes
- 3
- Peaks
- 44,384
- Non-redundant peaks
- 44,360
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 93762
- Official Gene Name
- Smarca5
- JASPAR
- MGI
- MGI:1935129
- Ensembl
- ENSMUSG00000031715
- UniProt
- Q91ZW3
- Genevisible
- Q91ZW3
- RefSeq
- Aliases
- 4933427E24Rik; D030040M08Rik; D330027N15Rik; MommeD4; Snf2h
Datasets Table for SMARCA5
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
SMARCA5 | NAc | Susceptible | GEO | Mus musculus | GSE54263 | 156 | ||
SMARCA5 | mESC | GEO | Mus musculus | GSE80049 | 276 | |||
SMARCA5 | mammary-epithelium | GEO | Mus musculus | GSE53583 | 43,952 | |||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |