SMARCC1

Information SMARCC1

Description

The protein encoded by this gene is a member of the SWI/SNF family of proteins, whose members display helicase and ATPase activities and which are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The encoded protein is part of the large ATP-dependent chromatin remodeling complex SNF/SWI and contains a predicted leucine zipper motif typical of many transcription factors. [provided by RefSeq, Jul 2008]

Full Name

SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
35
Biotypes
16
Peaks
821,023
Non-redundant peaks
330,990

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

NCBI Gene
6599
Official Gene Name
SMARCC1
JASPAR
Ensembl
ENSG00000173473
UniProt
Q92922
Genevisible
Q92922
RefSeq
NM_003074
Aliases
BAF155; CRACC1; Rsc8; SRG3; SWI3

External links
All peaks SMARCC1
Download BED file
Non redundant peaks SMARCC1
Download BED file
SEQUENCES SMARCC1
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for SMARCC1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SMARCC1 MCF-7 GEO Homo sapiens GSE124225 25,271
SMARCC1 MCF-7 KO GEO Homo sapiens GSE124225 10,158
SMARCC1 BT-16 Dox GEO Homo sapiens GSE71504 4,413
SMARCC1 Aska-SS shSSX GEO Homo sapiens GSE108025 51,730
SMARCC1 Aska-SS GEO Homo sapiens GSE108025 51,508
SMARCC1 BIN-67 GEO Homo sapiens GSE117734 23,605
SMARCC1 BIN-67 lentivirus-SMARCA4-T910M GEO Homo sapiens GSE117734 38,730
SMARCC1 BIN-67 lentivirus-SMARCA4 GEO Homo sapiens GSE117734 34,561
SMARCC1 BIN-67 ctrl GEO Homo sapiens GSE117734 14,178
SMARCC1 BIN-67 lentivirus-SMARCA4-K785R GEO Homo sapiens GSE117734 31,882
SMARCC1 SK-N-MC shEWSFLI1 GEO Homo sapiens GSE94275 18,139
SMARCC1 SK-N-MC GEO Homo sapiens GSE94275 38,115
SMARCC1 SK-N-MC shGFP GEO Homo sapiens GSE94275 17,356
SMARCC1 Hep-G2 GEO Homo sapiens GSE108514 25,031
SMARCC1 HS-SY-2 GEO Homo sapiens GSE108025 42,041
SMARCC1 TTC-549 Dox GEO Homo sapiens GSE71504 24,907
SMARCC1 TTC-549 NoDox GEO Homo sapiens GSE71504 20,275
SMARCC1 SYO-1 GEO Homo sapiens GSE108025 7,337
SMARCC1 SYO-1 shCt GEO Homo sapiens GSE139053 26,069
SMARCC1 SYO-1 shRING1A-B GEO Homo sapiens GSE139053 19,021
SMARCC1 G-401 NoDox GEO Homo sapiens GSE71504 1,802
SMARCC1 G-401 Dox GEO Homo sapiens GSE71504 4,533
SMARCC1 TTC-1240 delC GEO Homo sapiens GSE124903 34,916
SMARCC1 TTC-1240 SMARCB1-FL GEO Homo sapiens GSE124903 18,995
SMARCC1 TTC-1240 GEO Homo sapiens GSE124903 28,814
SMARCC1 TTC-1240 R377H GEO Homo sapiens GSE124903 30,525
SMARCC1 TTC-1240 empty GEO Homo sapiens GSE124903 14,223
SMARCC1 VCaP shARID1A GEO Homo sapiens GSE110655 70,880
SMARCC1 VCaP shERG GEO Homo sapiens GSE110655 77,115
SMARCC1 hiPSC GEO Homo sapiens GSE124903 44,177
SMARCC1 hiPSC WT GEO Homo sapiens GSE124903 43,409
SMARCC1 HeLa-S3 ENCODE Homo sapiens ENCSR000EDM 29,788
SMARCC1 HCT-116 GEO Homo sapiens GSE71510 2,347
SMARCC1 HCT-116 F1 GEO Homo sapiens GSE152144 8,259
SMARCC1 SCCOHT-1 GEO Homo sapiens GSE117734 34,908
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks