SOX6

Information SOX6

Description

This gene encodes a member of the D subfamily of sex determining region y-related transcription factors that are characterized by a conserved DNA-binding domain termed the high mobility group box and by their ability to bind the minor groove of DNA. The encoded protein is a transcriptional activator that is required for normal development of the central nervous system, chondrogenesis and maintenance of cardiac and skeletal muscle cells. The encoded protein interacts with other family members to cooperatively activate gene expression. Alternative splicing results in multiple transcript variants.[provided by RefSeq, Mar 2009]

Full Name

SRY-box transcription factor 6

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
3
Biotypes
2
Peaks
100,653
Non-redundant peaks
89,548

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

NCBI Gene
55553
Official Gene Name
SOX6
JASPAR
Ensembl
ENSG00000110693
UniProt
P35712
Genevisible
P35712
RefSeq
NM_001145811
Aliases
All peaks SOX6
Download BED file
Non redundant peaks SOX6
Download BED file
SEQUENCES SOX6
Download FASTA file
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Datasets Table for SOX6

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
SOX6 Hep-G2 ENCODE Homo sapiens ENCSR766TSU 52,685
SOX6 K-562 ENCODE Homo sapiens ENCSR788RSW 45,968
SOX6 Hep-G2 ENCODE Homo sapiens ENCSR543BVU 2,000
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks