SYD
Information SYD
- Description
Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.
- Full Name
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Source NCBI
- Species
Arabidopsis thaliana [tax_id: 3702]
- Genome
TAIR10
ReMap Statistics
- Datasets
- 5
- Biotypes
- 2
- Peaks
- 82,619
- Non-redundant peaks
- 47,892
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source AtTFDB
Datasets Table for SYD
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
SYD | Col | Col_inflorescence | syd | GEO | Arabidopsis thaliana | GSE104665 | 13,855 | |
SYD | Col | Col_inflorescence | GEO | Arabidopsis thaliana | GSE104665 | 24,891 | ||
SYD | Col | Col_inflorescence | swn | GEO | Arabidopsis thaliana | GSE104665 | 3,921 | |
SYD | Col | Col_inflorescence | clf | GEO | Arabidopsis thaliana | GSE104665 | 27,144 | |
SYD | Col-0 | Col-0_seedling | GEO | Arabidopsis thaliana | GSE126889 | 12,808 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |