Set1

Information Set1

Description

The gene SET domain containing 1 is referred to in FlyBase by the symbol DmelSet1 (CG40351, FBgn0040022). It is a protein_coding_gene from Dmel. It has 9 annotated transcripts and 9 polypeptides (1 unique). Gene sequence location is 3L:25107594..25115180. Its molecular function is described by: nucleic acid binding; histone methyltransferase activity (H3-K4 specific). It is involved in the biological process described with: histone H3-K4 trimethylation; histone H3-K4 dimethylation; histone H3-K4 methylation. 13 alleles are reported. The phenotypes of these alleles manifest in: wing; wing vein; posterior crossvein; trichogen cell. The phenotypic classes of alleles include: lethal; viable; some die during pupal stage; visible; lethal - all die before end of pupal stage. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, at stages throughout the pupal period, in adult female stages.

Full Name

SET domain containing 1

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
7,142
Non-redundant peaks
7,142

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
3354971
Official Gene Name
Set1
JASPAR
Ensembl
FBgn0040022
UniProt
Q5LJZ2
Genevisible
Q5LJZ2
RefSeq
NM_001170380
Aliases
Set1
All peaks Set1
Download BED file
Non redundant peaks Set1
Download BED file
SEQUENCES Set1
Download FASTA file
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Datasets Table for Set1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Set1 Schneider-2 homemade GEO Drosophila melanogaster GSE81795 7,142
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks