Six4

Information Six4

Description

The gene Six4 is referred to in FlyBase by the symbol DmelSix4 (CG3871, FBgn0027364). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 3L:20788886..20792777. Its molecular function is described by: RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific. It is involved in the biological process described with: gonad development; fat body development; myoblast fusion; mesoderm development; regulation of transcription by RNA polymerase II. 17 alleles are reported. The phenotypes of these alleles manifest in: trunk mesoderm derivative; gonadal somatic stem cell; foregut; adult segment; gut. The phenotypic classes of alleles include: increased mortality during development; increased mortality; increased cell number; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 00-06 hour embryonic stages.

Full Name

Six4

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
15,730
Non-redundant peaks
15,730

TF Classification

Familly
Homeo domain factors
Sub Familly
HD-SINE factors

Source JASPAR

External IDs

NCBI Gene
40297
Official Gene Name
Six4
JASPAR
MA0204.1
Ensembl
FBgn0027364
UniProt
Genevisible
RefSeq
NM_168872
Aliases
Six4
All peaks Six4
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Non redundant peaks Six4
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SEQUENCES Six4
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Datasets Table for Six4

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Six4 adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR176PDW 15,730
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks