Smox

Information Smox

Description

The gene Smad on X is referred to in FlyBase by the symbol DmelSmox (CG2262, FBgn0025800). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is X:8137041..8142279. Its molecular function is described by: DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding; I-SMAD binding; chromatin DNA binding; protein binding. It is involved in the biological process described with 22 unique terms, many of which group under: regulation of transcription, DNA-templated; response to hexose; neuron fate specification; response to BMP; cellular response to endogenous stimulus. 34 alleles are reported. The phenotypes of these alleles manifest in: transmedullary neuron Tm20; abdominal segment; lamina anlage; eye; intracellular anatomical structure. The phenotypic classes of alleles include: increased mortality; lethal - all die before end of P-stage; phenotype; increased cell size. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-06 and 12-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.

Full Name

Smad on X

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
3
Biotypes
2
Peaks
55,081
Non-redundant peaks
41,860

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
31738
Official Gene Name
Smox
JASPAR
Ensembl
FBgn0025800
UniProt
Genevisible
RefSeq
NM_078524
Aliases
CG2262; DSMAD2; DSmad2; DmelCG2262; SMAD2; SMOX; Sad; Smad; Smad2; SmoX; Smox; dSMAD2; dSmad2; dsmad2; l(1)G0348; sad; smad2; smox; ted; tmp
All peaks Smox
Download BED file
Non redundant peaks Smox
Download BED file
SEQUENCES Smox
Download FASTA file
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Datasets Table for Smox

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Smox adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR308HCJ 21,625
Smox Kc167 untreated_AF7948 GEO Drosophila melanogaster GSE68654 16,206
Smox Kc167 CTCFkd_AF7948 GEO Drosophila melanogaster GSE68654 17,250
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks