TBP
Information TBP
- Description
General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II. Component of a BRF2-containing transcription factor complex that regulates transcription mediated by RNA polymerase III. Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (pre-initiation complex) during RNA polymerase I-dependent transcription. The rate of PIC formation probably is primarily dependent on the rate of association of SL1 with the rDNA promoter. SL1 is involved in stabilization of nucleolar transcription factor 1/UBTF on rDNA. {ECO:0000250|UniProtKB:P20226}.(Source UnitProtKB).
- Full Name
TATA box binding protein
Source UniprotKB
- Species
Mus musculus [tax_id: 10090]
- Genome
mm10
ReMap Statistics
- Datasets
- 17
- Biotypes
- 7
- Peaks
- 304,278
- Non-redundant peaks
- 148,620
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 21374
- Official Gene Name
- Tbp
- JASPAR
- MGI
- MGI:101838
- Ensembl
- ENSMUSG00000014767
- UniProt
- P29037
- Genevisible
- P29037
- RefSeq
- NM_013684
- Aliases
- GTF2D1; Gtf2d; SCA17; TFIID
Datasets Table for TBP
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
TBP | CH12-LX | ENCODE | Mus musculus | ENCSR000ERP | 25,563 | |||
TBP | MEL | ENCODE | Mus musculus | ENCSR000EUB | 37,770 | |||
TBP | liver | TAF4-hep | GEO | Mus musculus | GSE57807 | 6,510 | ||
TBP | liver | ZT2 | GEO | Mus musculus | GSE96773 | 7,900 | ||
TBP | RAW264-7 | GEO | Mus musculus | GSE23619 | 12,697 | |||
TBP | trophoblast-stem-cell | GEO | Mus musculus | GSE39406 | 3,793 | |||
TBP | testis | GEO | Mus musculus | GSE79601 | 9,792 | |||
TBP | testis | KO | GEO | Mus musculus | GSE79601 | 9,911 | ||
TBP | mESC | EB8-WT | GEO | Mus musculus | GSE70661 | 21,726 | ||
TBP | mESC | ES-KO | GEO | Mus musculus | GSE70661 | 32,134 | ||
TBP | mESC | mitotic | GEO | Mus musculus | GSE109962 | 8,524 | ||
TBP | mESC | asynchronous | GEO | Mus musculus | GSE109962 | 32,834 | ||
TBP | liver | ZT10 | GEO | Mus musculus | GSE96773 | 1,787 | ||
TBP | liver | GEO | Mus musculus | GSE57807 | 21,567 | |||
TBP | mESC | B2 | GEO | Mus musculus | GSE22303 | 24,772 | ||
TBP | mESC | GEO | Mus musculus | GSE70661 | 37,617 | |||
TBP | mESC | EB8-KO | GEO | Mus musculus | GSE70661 | 9,381 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |