TCF3
Information TCF3
- Description
This gene encodes a member of the E protein (class I) family of helix-loop-helix transcription factors. E proteins activate transcription by binding to regulatory E-box sequences on target genes as heterodimers or homodimers, and are inhibited by heterodimerization with inhibitor of DNA-binding (class IV) helix-loop-helix proteins. E proteins play a critical role in lymphopoiesis, and the encoded protein is required for B and T lymphocyte development. Deletion of this gene or diminished activity of the encoded protein may play a role in lymphoid malignancies. This gene is also involved in several chromosomal translocations that are associated with lymphoid malignancies including pre-B-cell acute lymphoblastic leukemia (t(1;19), with PBX1), childhood leukemia (t(19;19), with TFPT) and acute leukemia (t(12;19), with ZNF384). Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the short arm of chromosome 9. [provided by RefSeq, Sep 2011]
- Full Name
transcription factor 3
Source NCBI
- Species
Homo sapiens [tax_id: 9606]
- Genome
hg38
ReMap Statistics
- Datasets
- 13
- Biotypes
- 12
- Peaks
- 280,446
- Non-redundant peaks
- 195,424
TF Classification
- Super Class
- Basic domains
- Class
- Basic helix-loop-helix factors (bHLH)
- Familly
- E2A-related factors
- Sub Familly
- None
Source TFClass
External IDs
- NCBI Gene
- 6929
- Official Gene Name
- TCF3
- JASPAR
- MA0522
- Ensembl
- ENSG00000071564
- UniProt
- P15923
- Genevisible
- P15923
- RefSeq
- NM_001136139
- Aliases
- AGM8; E2A; E47; ITF1; MGC129647; MGC129648; TCF-3; VDIR; bHLHb21; p75
Datasets Table for TCF3
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
TCF3 | RCH-ACV | GEO | Homo sapiens | GSE85988 | 48,387 | |||
TCF3 | RPMI8402 | GEO | Homo sapiens | GSE39179 | 1,528 | |||
TCF3 | Ramos | GEO | Homo sapiens | GSE139810 | 6,723 | |||
TCF3 | 697 | HF | GEO | Homo sapiens | GSE138031 | 10,006 | ||
TCF3 | Jurkat | GEO | Homo sapiens | GSE29180 | 92 | |||
TCF3 | SEM | GEO | Homo sapiens | GSE85988 | 6,267 | |||
TCF3 | CCRF-CEM | GEO | Homo sapiens | GSE33850 | 598 | |||
TCF3 | Kasumi-1 | GEO | Homo sapiens | GSE43834 | 74,850 | |||
TCF3 | Kasumi-1 | GEO | Homo sapiens | GSE114644 | 564 | |||
TCF3 | Hep-G2 | ENCODE | Homo sapiens | ENCSR911MML | 5,280 | |||
TCF3 | K-562 | ENCODE | Homo sapiens | ENCSR970OJY | 39,949 | |||
TCF3 | GM12878 | ENCODE | Homo sapiens | ENCSR000BQT | 62,798 | |||
TCF3 | NPC | GEO | Homo sapiens | GSE154479 | 23,404 | |||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |