TCF3

Information TCF3

Description

This gene encodes a member of the E protein (class I) family of helix-loop-helix transcription factors. E proteins activate transcription by binding to regulatory E-box sequences on target genes as heterodimers or homodimers, and are inhibited by heterodimerization with inhibitor of DNA-binding (class IV) helix-loop-helix proteins. E proteins play a critical role in lymphopoiesis, and the encoded protein is required for B and T lymphocyte development. Deletion of this gene or diminished activity of the encoded protein may play a role in lymphoid malignancies. This gene is also involved in several chromosomal translocations that are associated with lymphoid malignancies including pre-B-cell acute lymphoblastic leukemia (t(1;19), with PBX1), childhood leukemia (t(19;19), with TFPT) and acute leukemia (t(12;19), with ZNF384). Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the short arm of chromosome 9. [provided by RefSeq, Sep 2011]

Full Name

transcription factor 3

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
13
Biotypes
12
Peaks
280,446
Non-redundant peaks
195,424

TF Classification

Super Class
Basic domains
Class
Basic helix-loop-helix factors (bHLH)
Familly
E2A-related factors
Sub Familly
None

Source TFClass

External IDs

NCBI Gene
6929
Official Gene Name
TCF3
JASPAR
MA0522
Ensembl
ENSG00000071564
UniProt
P15923
Genevisible
P15923
RefSeq
NM_001136139
Aliases
AGM8; E2A; E47; ITF1; MGC129647; MGC129648; TCF-3; VDIR; bHLHb21; p75
All peaks TCF3
Download BED file
Non redundant peaks TCF3
Download BED file
SEQUENCES TCF3
Download FASTA file
DOWNLOAD All ReMap
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Datasets Table for TCF3

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
TCF3 RCH-ACV GEO Homo sapiens GSE85988 48,387
TCF3 RPMI8402 GEO Homo sapiens GSE39179 1,528
TCF3 Ramos GEO Homo sapiens GSE139810 6,723
TCF3 697 HF GEO Homo sapiens GSE138031 10,006
TCF3 Jurkat GEO Homo sapiens GSE29180 92
TCF3 SEM GEO Homo sapiens GSE85988 6,267
TCF3 CCRF-CEM GEO Homo sapiens GSE33850 598
TCF3 Kasumi-1 GEO Homo sapiens GSE43834 74,850
TCF3 Kasumi-1 GEO Homo sapiens GSE114644 564
TCF3 Hep-G2 ENCODE Homo sapiens ENCSR911MML 5,280
TCF3 K-562 ENCODE Homo sapiens ENCSR970OJY 39,949
TCF3 GM12878 ENCODE Homo sapiens ENCSR000BQT 62,798
TCF3 NPC GEO Homo sapiens GSE154479 23,404
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks