TOP1ALPHA

Information TOP1ALPHA

Description

Encodes a type-I DNA topoisomerase I. Disruptions in this gene affect phyllotaxis and plant architecture suggesting that the gene plays a critical role in the maintenance of a regular pattern of organ initiation. Isolated as a protein oxidized during seed germination; proteomics approach revealed differences in de novo synthesis levels of this protein in condition with vs. without salicylic acid in the period from 0 to 40 hrs. following seed imbibition. Functions in stem cell maintenance at all stages of shoot and floral meristems and in the regulation of gene silencing.

Full Name

DNA topoisomerase I alpha

Source NCBI

Species

Arabidopsis thaliana [tax_id: 3702]

Genome

TAIR10

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
262
Non-redundant peaks
262

TF Classification

Familly
NA
Sub Familly
NA

Source AtTFDB

External IDs

NCBI Gene
835623
Official Gene Name
TOP1ALPHA
JASPAR
Ensembl
AT5G55300
UniProt
P30181
Genevisible
P30181
RefSeq
NM_124912.5
Aliases
All peaks TOP1ALPHA
Download BED file
Non redundant peaks TOP1ALPHA
Download BED file
SEQUENCES TOP1ALPHA
Download FASTA file
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Datasets Table for TOP1ALPHA

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
TOP1ALPHA Ler Ler_inflorescence GEO Arabidopsis thaliana GSE53950 262
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks