TRP53

Information TRP53

Description

This gene encodes tumor protein p53, which responds to diverse cellular stresses to regulate target genes that induce cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. p53 protein is expressed at low level in normal cells and at a high level in a variety of transformed cell lines, where it's believed to contribute to transformation and malignancy. p53 is a DNA-binding protein containing transcription activation, DNA-binding, and oligomerization domains. It is postulated to bind to a p53-binding site and activate expression of downstream genes that inhibit growth and/or invasion, and thus function as a tumor suppressor. Mice deficient for this gene are developmentally normal but are susceptible to spontaneous tumors. Evidence to date shows that this gene contains one promoter, in contrast to alternative promoters of the human gene, and transcribes a few of splice variants which encode different isoforms, although the biological validity or the full-length nature of some variants has not been determined. [provided by RefSeq, Jul 2008]

Full Name

transformation related protein 53

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
31
Biotypes
10
Peaks
438,744
Non-redundant peaks
151,588

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
22059
Official Gene Name
Trp53
JASPAR
MGI
MGI:98834
Ensembl
ENSMUSG00000059552
UniProt
P02340
Genevisible
P02340
RefSeq
NM_011640
Aliases
Tp53; bbl; bfy; bhy; p44; p53
All peaks TRP53
Download BED file
Non redundant peaks TRP53
Download BED file
SEQUENCES TRP53
Download FASTA file
DOWNLOAD All ReMap
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Datasets Table for TRP53

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
TRP53 spleen 7Gy-4h GEO Mus musculus GSE71175 28,273
TRP53 spleen B-cell GEO Mus musculus GSE71175 4,506
TRP53 spleen GEO Mus musculus GSE71175 4,411
TRP53 MEF KO GEO Mus musculus GSE46240 218
TRP53 MEF GEO Mus musculus GSE46240 9,073
TRP53 lymphoma H2O GEO Mus musculus GSE80186 7,348
TRP53 lymphoma minus-Nutilin GEO Mus musculus GSE80186 16,426
TRP53 lymphoma plus-Nutilin GEO Mus musculus GSE80186 7,756
TRP53 lymphoma NT GEO Mus musculus GSE80186 7,548
TRP53 lymphoma OHT GEO Mus musculus GSE80186 24,317
TRP53 kidney GEO Mus musculus GSE49916 4,889
TRP53 mESC Trp53-S18P GEO Mus musculus GSE26361 7,788
TRP53 mESC Trp53-S18P_Adr8h GEO Mus musculus GSE26361 51,999
TRP53 mESC Adr8h GEO Mus musculus GSE26361 69,829
TRP53 mESC 2i GEO Mus musculus GSE141177 515
TRP53 mESC serum GEO Mus musculus GSE141177 443
TRP53 NmuMG L-pWPI-EV GEO Mus musculus GSE87002 9,499
TRP53 NmuMG Adri-8h GEO Mus musculus GSE87002 40,998
TRP53 BMDM 2h GEO Mus musculus GSE100962 15,354
TRP53 BMDM GEO Mus musculus GSE100962 5,465
TRP53 BMDM 6h GEO Mus musculus GSE100962 1,584
TRP53 primary-adipocyte GEO Mus musculus GSE132715 4,227
TRP53 MEF-1 GEO Mus musculus GSE55727 9,079
TRP53 lymphoma doxorubicin GEO Mus musculus GSE80186 21,753
TRP53 spleen B-cell_7Gy-4h GEO Mus musculus GSE71175 32,838
TRP53 BMDM 1h GEO Mus musculus GSE100962 10,076
TRP53 mESC GEO Mus musculus GSE26361 15,383
TRP53 EBs GEO Mus musculus GSE70486 3,451
TRP53 EBs Activin GEO Mus musculus GSE70486 2,830
TRP53 NmuMG L-pWPI-MycER GEO Mus musculus GSE87002 7,450
TRP53 NmuMG GEO Mus musculus GSE87002 13,418
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks