Tbp
Information Tbp
- Description
The gene TATA binding protein is referred to in FlyBase by the symbol DmelTbp (CG9874, FBgn0003687). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is 2R:21686192..21687642. Its molecular function is described by 9 unique terms, many of which group under: transcription regulator activity; general transcription initiation factor activity; molecular function regulator; protein binding; nucleic acid binding. It is involved in the biological process described with 9 unique terms, many of which group under: mRNA transcription; tRNA transcription by RNA polymerase III; cellular component organization or biogenesis; RNA polymerase II preinitiation complex assembly; tRNA transcription. 21 alleles are reported. The phenotypes of these alleles manifest in: eye; adult brain; rhabdomere. The phenotypic classes of alleles include: visible; locomotor behavior defective; lethal - all die before end of first instar larval stage; some die during first instar larval stage; neuroanatomy defective; short lived. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages.
- Full Name
TATA binding protein
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 5
- Biotypes
- 2
- Peaks
- 37,099
- Non-redundant peaks
- 24,652
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
Datasets Table for Tbp
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
Tbp | adult | whole-fly_insertion | ENCODE | Drosophila melanogaster | ENCSR599DVZ | 13,778 | ||
Tbp | embryo | pre-MBT | GEO | Drosophila melanogaster | GSE41700 | 181 | ||
Tbp | embryo | 2h-4h_ab-517_homemade | GEO | Drosophila melanogaster | GSE52029 | 12,447 | ||
Tbp | embryo | 2h-4h_ab-518_homemade | GEO | Drosophila melanogaster | GSE52029 | 6,402 | ||
Tbp | embryo | MBT | GEO | Drosophila melanogaster | GSE41700 | 4,291 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |