Trf2
Information Trf2
- Description
The gene TATA box binding protein-related factor 2 is referred to in FlyBase by the symbol DmelTrf2 (CG18009, FBgn0261793). It is a protein_coding_gene from Dmel. It has 6 annotated transcripts and 6 polypeptides (3 unique). Gene sequence location is X:8409272..8433011. Its molecular function is described by 7 unique terms, many of which group under: binding; molecular function regulator; transcription regulator activity; general transcription initiation factor activity; RNA polymerase II transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with 8 unique terms, many of which group under: gland development; response to organic cyclic compound; open tracheal system development; response to oxygen-containing compound; cell development. 64 alleles are reported. The phenotypes of these alleles manifest in: fat body; adipose system; portion of tissue; larval neuroblast; tarsal segment. The phenotypic classes of alleles include: phenotype; lethal; increased mortality during development; some die during P-stage.
- Full Name
TATA box binding protein-related factor 2
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 3
- Biotypes
- 2
- Peaks
- 17,814
- Non-redundant peaks
- 14,030
TF Classification
- Familly
- NA
- Sub Familly
- NA
Source JASPAR
External IDs
- NCBI Gene
- 31773
- Official Gene Name
- Trf2
- JASPAR
- Ensembl
- FBgn0261793
- UniProt
- Genevisible
- RefSeq
- NM_206654
- Aliases
- CG11195; CG18009; DmelCG18009; TLF; TRF2; Trf2; dTRF2; dTRF2L; dTRF2S; dTrf2; l(1)G0039; l(1)G0071; l(1)G0295; l(1)G0425; p79/TRF2; trf2
Datasets Table for Trf2
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
Trf2 | Schneider-2 | GEO | Drosophila melanogaster | GSE97841 | 236 | |||
Trf2 | embryo | 2h-4h_ab-275_homemade | GEO | Drosophila melanogaster | GSE52029 | 7,783 | ||
Trf2 | embryo | 2h-4h_ab-274_homemade | GEO | Drosophila melanogaster | GSE52029 | 9,795 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |