Trl
Information Trl
- Description
The gene Trithorax-like is referred to in FlyBase by the symbol DmelTrl (CG33261, FBgn0013263). It is a protein_coding_gene from Dmel. It has 10 annotated transcripts and 10 polypeptides (5 unique). Gene sequence location is 3L:14747929..14761049. Its molecular function is described by 11 unique terms, many of which group under: binding; protein binding; organic cyclic compound binding; heterocyclic compound binding; transcription regulator activity. It is involved in the biological process described with 16 unique terms, many of which group under: organelle organization; positive regulation of phosphorylation; protein-DNA complex subunit organization; cellular component biogenesis; imaginal disc morphogenesis. 100 alleles are reported. The phenotypes of these alleles manifest in: segmental subdivision of integument; chorionic specialization; tarsal segment; anatomical cluster; supramolecular complex. The phenotypic classes of alleles include: female sterile; increased mortality; meiotic cell cycle defective; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages. This gene is annotated by FlyBase as a dicistronic gene, meaning that some or all of its transcripts encode two or more polypeptide-coding open reading frames (ORFs) , with each ORF assigned to a different gene. The distribution of RNA-Seq coverage data amongst the different encoded genes cannot be determined.
- Full Name
Trithorax-like
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 19
- Biotypes
- 6
- Peaks
- 219,995
- Non-redundant peaks
- 65,550
TF Classification
- Familly
- C2H2 zinc finger factors
- Sub Familly
Source JASPAR
Datasets Table for Trl
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
Trl | Kc167 | GEO | Drosophila melanogaster | GSE54529 | 3,007 | |||
Trl | Schneider-2 | GAFRNAi | GEO | Drosophila melanogaster | GSE157235 | 18,843 | ||
Trl | Schneider-2 | Clamp | GEO | Drosophila melanogaster | GSE107059 | 4,111 | ||
Trl | Schneider-2 | LACZRNAi | GEO | Drosophila melanogaster | GSE157235 | 16,806 | ||
Trl | Schneider-2 | GFP | GEO | Drosophila melanogaster | GSE107059 | 3,416 | ||
Trl | Schneider-2 | Trl | GEO | Drosophila melanogaster | GSE107059 | 3,758 | ||
Trl | Schneider-2 | BAPRNAi | GEO | Drosophila melanogaster | GSE157235 | 19,096 | ||
Trl | adult | whole-fly | ENCODE | Drosophila melanogaster | ENCSR155JVI | 16,030 | ||
Trl | adult | whole-fly | ENCODE | Drosophila melanogaster | ENCSR724XTR | 12,189 | ||
Trl | adult | whole-fly_site-specific-recombination_insertion | ENCODE | Drosophila melanogaster | ENCSR629WQT | 22,368 | ||
Trl | embryo | 8h-16h | GEO | Drosophila melanogaster | GSE38594 | 8,764 | ||
Trl | embryo | orer | GEO | Drosophila melanogaster | GSE68983 | 15,437 | ||
Trl | Kc167 | GEO | Drosophila melanogaster | GSE80700 | 15,175 | |||
Trl | S2-DRSC | abd-A-HA | GEO | Drosophila melanogaster | GSE101554 | 17,304 | ||
Trl | S2-DRSC | GEO | Drosophila melanogaster | GSE101554 | 10,248 | |||
Trl | S2-DRSC | GEO | Drosophila melanogaster | GSE40646 | 6,579 | |||
Trl | S2-DRSC | KD | GEO | Drosophila melanogaster | GSE40646 | 3,040 | ||
Trl | third-instar | wing-imaginal-disc | GEO | Drosophila melanogaster | GSE38594 | 5,431 | ||
Trl | third-instar | imaginal-disc_salivary-gland | GEO | Drosophila melanogaster | GSE70632 | 18,393 | ||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |