Trl

Information Trl

Description

The gene Trithorax-like is referred to in FlyBase by the symbol DmelTrl (CG33261, FBgn0013263). It is a protein_coding_gene from Dmel. It has 10 annotated transcripts and 10 polypeptides (5 unique). Gene sequence location is 3L:14747929..14761049. Its molecular function is described by 11 unique terms, many of which group under: binding; protein binding; organic cyclic compound binding; heterocyclic compound binding; transcription regulator activity. It is involved in the biological process described with 16 unique terms, many of which group under: organelle organization; positive regulation of phosphorylation; protein-DNA complex subunit organization; cellular component biogenesis; imaginal disc morphogenesis. 100 alleles are reported. The phenotypes of these alleles manifest in: segmental subdivision of integument; chorionic specialization; tarsal segment; anatomical cluster; supramolecular complex. The phenotypic classes of alleles include: female sterile; increased mortality; meiotic cell cycle defective; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages. This gene is annotated by FlyBase as a dicistronic gene, meaning that some or all of its transcripts encode two or more polypeptide-coding open reading frames (ORFs) , with each ORF assigned to a different gene. The distribution of RNA-Seq coverage data amongst the different encoded genes cannot be determined.

Full Name

Trithorax-like

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
19
Biotypes
6
Peaks
219,995
Non-redundant peaks
65,550

TF Classification

Familly
C2H2 zinc finger factors
Sub Familly

Source JASPAR

External IDs

NCBI Gene
2768981
Official Gene Name
Trl
JASPAR
MA0205.1
Ensembl
FBgn0013263
UniProt
Q08605
Genevisible
Q08605
RefSeq
NM_206360
Aliases
Trl
All peaks Trl
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Non redundant peaks Trl
Download BED file
SEQUENCES Trl
Download FASTA file
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Datasets Table for Trl

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
Trl Kc167 GEO Drosophila melanogaster GSE54529 3,007
Trl Schneider-2 GAFRNAi GEO Drosophila melanogaster GSE157235 18,843
Trl Schneider-2 Clamp GEO Drosophila melanogaster GSE107059 4,111
Trl Schneider-2 LACZRNAi GEO Drosophila melanogaster GSE157235 16,806
Trl Schneider-2 GFP GEO Drosophila melanogaster GSE107059 3,416
Trl Schneider-2 Trl GEO Drosophila melanogaster GSE107059 3,758
Trl Schneider-2 BAPRNAi GEO Drosophila melanogaster GSE157235 19,096
Trl adult whole-fly ENCODE Drosophila melanogaster ENCSR155JVI 16,030
Trl adult whole-fly ENCODE Drosophila melanogaster ENCSR724XTR 12,189
Trl adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR629WQT 22,368
Trl embryo 8h-16h GEO Drosophila melanogaster GSE38594 8,764
Trl embryo orer GEO Drosophila melanogaster GSE68983 15,437
Trl Kc167 GEO Drosophila melanogaster GSE80700 15,175
Trl S2-DRSC abd-A-HA GEO Drosophila melanogaster GSE101554 17,304
Trl S2-DRSC GEO Drosophila melanogaster GSE101554 10,248
Trl S2-DRSC GEO Drosophila melanogaster GSE40646 6,579
Trl S2-DRSC KD GEO Drosophila melanogaster GSE40646 3,040
Trl third-instar wing-imaginal-disc GEO Drosophila melanogaster GSE38594 5,431
Trl third-instar imaginal-disc_salivary-gland GEO Drosophila melanogaster GSE70632 18,393
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks