UBTF

Information UBTF

Description

Recognizes the ribosomal RNA gene promoter and activates transcription mediated by RNA polymerase I through cooperative interactions with the transcription factor SL1/TIF-IB complex. It binds specifically to the upstream control element. {ECO:0000269|PubMed:20168301}.

Full Name

upstream binding transcription factor, RNA polymerase I

Source UniprotKB

Species

Mus musculus [tax_id: 10090]

Genome

mm10

ReMap Statistics

Datasets
5
Biotypes
3
Peaks
56,709
Non-redundant peaks
33,901

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
21429
Official Gene Name
Ubtf
JASPAR
MGI
MGI:98512
Ensembl
ENSMUSG00000020923
UniProt
P25976
Genevisible
P25976
RefSeq
NM_011551
Aliases
A930005G04Rik; NOR-90; Tcfubf; UBF; UBF-1; UBF1

External links
All peaks UBTF
Download BED file
Non redundant peaks UBTF
Download BED file
SEQUENCES UBTF
Download FASTA file
DOWNLOAD All ReMap
Got to catalogue

Datasets Table for UBTF

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
UBTF MEL ENCODE Mus musculus ENCSR000ESJ 9,576
UBTF bone-marrow GEO Mus musculus GSE123324 14,124
UBTF bone-marrow malignant GEO Mus musculus GSE123324 16,670
UBTF bone-marrow premalignant GEO Mus musculus GSE123324 10,583
UBTF CH12-LX ENCODE Mus musculus ENCSR000EQX 5,756
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks