VAL1

Information VAL1

Description

HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50##M ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.

Full Name

B3 domain-containing transcription repressor VAL1

Source NCBI

Species

Arabidopsis thaliana [tax_id: 3702]

Genome

TAIR10

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
9,754
Non-redundant peaks
9,754

TF Classification

Familly
NA
Sub Familly
NA

Source AtTFDB

External IDs

NCBI Gene
817597
Official Gene Name
VAL1
JASPAR
Ensembl
AT2G30470
UniProt
Q8W4L5
Genevisible
Q8W4L5
RefSeq
NM_179815.3
Aliases
All peaks VAL1
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Non redundant peaks VAL1
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SEQUENCES VAL1
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Datasets Table for VAL1

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
VAL1 Col-0 Col-0_seedling GEO Arabidopsis thaliana GSE145387 9,754
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks