Vsx1
Information Vsx1
- Description
The gene Visual system homeobox 1 is referred to in FlyBase by the symbol DmelVsx1 (CG4136, FBgn0263511). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is X:5594255..5612865. Its molecular function is described by: DNA-binding transcription factor activity; sequence-specific double-stranded DNA binding. It is involved in the biological process described with: positive regulation of neural precursor cell proliferation; optic lobe placode development; negative regulation of transcription by RNA polymerase II; regulation of transcription by RNA polymerase II. 14 alleles are reported. The phenotype of these alleles manifest in: adult optic lobe. The phenotypic classes of alleles include: developmental rate defective; fertile; lethal; viable; neuroanatomy defective.
- Full Name
Visual system homeobox 1
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 1
- Biotypes
- 1
- Peaks
- 22,679
- Non-redundant peaks
- 22,679
TF Classification
- Familly
- Homeo domain factors
- Sub Familly
- Paired-related HD factors
Source JASPAR
External IDs
- NCBI Gene
- 31470
- Official Gene Name
- Vsx1
- JASPAR
- MA0181.1
- Ensembl
- FBgn0263511
- UniProt
- Genevisible
- RefSeq
- NM_132004
- Aliases
- CG4136; Chx1; DChx1; DVSX1; Dchx1; DmelCG4136; Vsx-1; Vsx1; dChx1; dVsx1; lincRNA.S8688
Datasets Table for Vsx1
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
|---|---|---|---|---|---|---|---|---|
| Vsx1 | adult | whole-fly_site-specific-recombination_insertion | ENCODE | Drosophila melanogaster | ENCSR564UWC | 22,679 | ||
| Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |