ZIC2

Information ZIC2

Description

This gene encodes a member of the ZIC family of C2H2-type zinc finger proteins. This protein functions as a transcriptional repressor and may regulate tissue specific expression of dopamine receptor D1. Expansion of an alanine repeat in the C-terminus of the encoded protein and other mutations in this gene cause holoprosencephaly type 5. Holoprosencephaly is the most common structural anomaly of the human brain. A polyhistidine tract polymorphism in this gene may be associated with increased risk of neural tube defects. This gene is closely linked to a gene encoding zinc finger protein of the cerebellum 5, a related family member on chromosome 13. [provided by RefSeq, Jul 2016]

Full Name

Zic family member 2

Source NCBI

Species

Homo sapiens [tax_id: 9606]

Genome

hg38

ReMap Statistics

Datasets
4
Biotypes
2
Peaks
12,073
Non-redundant peaks
9,758

TF Classification

Super Class
NA
Class
NA
Familly
NA
Sub Familly
NA

Source TFClass

External IDs

NCBI Gene
7546
Official Gene Name
ZIC2
JASPAR
Ensembl
ENSG00000043355
UniProt
O95409
Genevisible
O95409
RefSeq
NM_007129
Aliases
HPE5
All peaks ZIC2
Download BED file
Non redundant peaks ZIC2
Download BED file
SEQUENCES ZIC2
Download FASTA file
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Datasets Table for ZIC2

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
ZIC2 BCBL-1 latent GEO Homo sapiens GSE102462 1,353
ZIC2 BCBL-1 lytic GEO Homo sapiens GSE102462 351
ZIC2 HCT-116 WT GEO Homo sapiens GSE127960 9,287
ZIC2 HCT-116 C3 GEO Homo sapiens GSE127960 1,082
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks