abd-A
Information abd-A
- Description
The gene abdominal A is referred to in FlyBase by the symbol Dmelabd-A (CG10325, FBgn0000014). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (2 unique). Gene sequence location is 3R:16807214..16830049. Its molecular function is described by: DNA-binding transcription factor activity; RNA polymerase II cis-regulatory region sequence-specific DNA binding; sequence-specific DNA binding; cis-regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific. It is involved in the biological process described with 27 unique terms, many of which group under: developmental process involved in reproduction; movement of cell or subcellular component; multicellular organism reproduction; mesodermal cell fate commitment; cardiac muscle tissue development. 135 alleles are reported. The phenotypes of these alleles manifest in: dorsal vessel primordium; larval abdominal segment 11; primordial germ cell; A1-7 ventral acute muscle 1; lch5 ligament attachment cell. The phenotypic classes of alleles include: increased mortality during development; cell number defective; sterile; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed during late larval stages, during early pupal stages.
- Full Name
abdominal A
Source FlyBase
- Species
Drosophila melanogaster [tax_id: 7227]
- Genome
dm6
ReMap Statistics
- Datasets
- 5
- Biotypes
- 3
- Peaks
- 82,502
- Non-redundant peaks
- 48,908
TF Classification
- Familly
- Homeo domain factors
- Sub Familly
- HOX-related factors
Source JASPAR
Datasets Table for abd-A
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |
---|---|---|---|---|---|---|---|---|
abd-A | adult | whole-fly_site-specific-recombination_insertion | ENCODE | Drosophila melanogaster | ENCSR609JDR | 32,918 | ||
abd-A | Kc167 | GEO | Drosophila melanogaster | GSE122574 | 9,354 | |||
abd-A | Kc167 | Hth | GEO | Drosophila melanogaster | GSE122574 | 10,305 | ||
abd-A | Kc167 | GEO | Drosophila melanogaster | GSE69796 | 9,422 | |||
abd-A | S2-DRSC | GEO | Drosophila melanogaster | GSE101554 | 20,503 | |||
Target name | Target modification | Ecotype/Strain | Biotype | Biotype modification | Source | Species | Experiment | Peaks |