brk

Information brk

Description

The gene brinker is referred to in FlyBase by the symbol Dmelrk (CG9653, FBgn0024250). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is X:7307939..7311132. Its molecular function is described by 6 unique terms, many of which group under: binding; protein binding; molecular function regulator; transcription coregulator activity; DNA binding. It is involved in the biological process described with 10 unique terms, many of which group under: system development; tissue development; cellular protein-containing complex assembly; cellular response to stimulus; Malpighian tubule development. 90 alleles are reported. The phenotypes of these alleles manifest in: larval mesothoracic segment; egg chorion; longitudinal connective; compound sense organ; larval abdominal segment A1-7. The phenotypic classes of alleles include: increased mortality during development; phenotype; female fertile; partially lethal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 00-18 hour embryonic stages.

Full Name

brinker

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
2
Biotypes
2
Peaks
19,128
Non-redundant peaks
18,425

TF Classification

Familly
NA
Sub Familly
REM

Source JASPAR

External IDs

NCBI Gene
31665
Official Gene Name
brk
JASPAR
MA0213.1
Ensembl
FBgn0024250
UniProt
Genevisible
RefSeq
NM_078514
Aliases
BRK; Brk; CG9653; Dm brk; DmelCG9653; brk; ssg-1
All peaks brk
Download BED file
Non redundant peaks brk
Download BED file
SEQUENCES brk
Download FASTA file
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Datasets Table for brk

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
brk adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR200GOV 17,859
brk third-instar wing-imaginal-disc GEO Drosophila melanogaster GSE40957 1,269
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks