cyc

Information cyc

Description

The gene cycle is referred to in FlyBase by the symbol Dmelcyc (CG8727, FBgn0023094). It is a protein_coding_gene from Dmel. It has one annotated transcript and one polypeptide. Gene sequence location is 3L:19813770..19815938. Its molecular function is described by: RNA polymerase II transcription regulatory region sequence-specific DNA binding; DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding; protein heterodimerization activity. It is involved in the biological process described with 12 unique terms, many of which group under: circadian rhythm; response to organic substance; regulation of behavior; locomotory behavior; developmental process. 27 alleles are reported. The phenotypes of these alleles manifest in: LN period neuron; adult heart. The phenotypic classes of alleles include: circadian rhythm defective; phenotype; circadian behavior defective; behavior defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed within 00-06 hour embryonic stages, in adult female stages.

Full Name

cycle

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
3
Biotypes
1
Peaks
28,727
Non-redundant peaks
27,390

TF Classification

Familly
NA
Sub Familly
NA

Source JASPAR

External IDs

NCBI Gene
40162
Official Gene Name
cyc
JASPAR
Ensembl
FBgn0023094
UniProt
O61734
Genevisible
O61734
RefSeq
NM_079444
Aliases
cyc
All peaks cyc
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Non redundant peaks cyc
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SEQUENCES cyc
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Datasets Table for cyc

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
cyc adult whole-fly_site-specific-recombination_insertion ENCODE Drosophila melanogaster ENCSR007HUT 21,694
cyc adult 5-10d_body GEO Drosophila melanogaster GSE40467 3,913
cyc adult 5-10d_head GEO Drosophila melanogaster GSE40467 3,120
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks