exd

Information exd

Description

The gene extradenticle is referred to in FlyBase by the symbol Dmelexd (CG8933, FBgn0000611). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (1 unique). Gene sequence location is X:15992468..15996509. Its molecular function is described by 11 unique terms, many of which group under: binding; protein binding; transcription regulator activity; molecular function regulator; nucleic acid binding. It is involved in the biological process described with 12 unique terms, many of which group under: anatomical structure development; multicellular organism development; nervous system development; anatomical structure morphogenesis; animal organ morphogenesis. 68 alleles are reported. The phenotypes of these alleles manifest in: embryonic gnathal segment; depressor muscle; arista; trochanter; adult abdominal segment 7. The phenotypic classes of alleles include: increased mortality during development; lethal; phenotype; partially lethal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, during early pupal stages.

Full Name

extradenticle

Source FlyBase

Species

Drosophila melanogaster [tax_id: 7227]

Genome

dm6

ReMap Statistics

Datasets
1
Biotypes
1
Peaks
12,244
Non-redundant peaks
12,244

TF Classification

Familly
Homeo domain factors
Sub Familly
TALE-type homeo domain factors

Source JASPAR

External IDs

NCBI Gene
32567
Official Gene Name
exd
JASPAR
MA0222.1
Ensembl
FBgn0000611
UniProt
P40427
Genevisible
P40427
RefSeq
NM_167478
Aliases
CG8933; DExd; Dm-EXD; DmelCG8933; Dpbx; EXD; Exd; Pbx1; anon-EST:fe1H3; exd; l(1)IV; lincRNA.S9404; td48
All peaks exd
Download BED file
Non redundant peaks exd
Download BED file
SEQUENCES exd
Download FASTA file
DOWNLOAD All ReMap
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Datasets Table for exd

Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks
exd Kc167 Hth GEO Drosophila melanogaster GSE122574 12,244
Target name Target modification Ecotype/Strain Biotype Biotype modification Source Species Experiment Peaks